Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MTND5P14-201ENST00000441481 1267 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 AL121769.1-201ENST00000469473 401 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 AC096745.1-201ENST00000509945 370 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
USP9XQ93008 Z96811.1-201ENST00000445880 108 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 MRPL42P6-201ENST00000486397 371 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 AC010625.1-201ENST00000511296 403 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 AC008269.2-201ENST00000561915 1105 ntBASIC0.7□□□□□ -2.3
USP9XQ93008 HMGB1P17-201ENST00000403495 628 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 PTGES3P2-201ENST00000407942 482 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.69□□□□□ -2.3
USP9XQ93008 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.69□□□□□ -2.3
USP9XQ93008 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.69□□□□□ -2.3
USP9XQ93008 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.69□□□□□ -2.3
USP9XQ93008 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.69□□□□□ -2.3
USP9XQ93008 RBM43P1-201ENST00000476891 1081 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 MRPS33P3-201ENST00000513456 322 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.69□□□□□ -2.3
USP9XQ93008 AL050343.2-201ENST00000607338 280 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 AC073569.3-201ENST00000619055 682 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.69□□□□□ -2.3
USP9XQ93008 XKRY2-202ENST00000623874 1581 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 XKRY-202ENST00000624960 1581 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 RNU6-799P-201ENST00000363567 107 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 RPS20P15-201ENST00000412792 311 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 AC004022.2-201ENST00000413824 193 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
USP9XQ93008 HMGB1P46-201ENST00000520062 610 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.69□□□□□ -2.3
USP9XQ93008 AC002545.1-201ENST00000592511 181 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 ELL2P3-201ENST00000457883 1602 ntBASIC0.69□□□□□ -2.3
USP9XQ93008 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
USP9XQ93008 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
USP9XQ93008 MTND4P27-201ENST00000450813 1354 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 MIR150-201ENST00000385048 84 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 PTP4A1P1-201ENST00000420539 515 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AC243772.1-201ENST00000451620 410 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.68□□□□□ -2.3
USP9XQ93008 RPS20P20-201ENST00000460498 340 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.68□□□□□ -2.3
USP9XQ93008 RNA5SP134-201ENST00000516492 96 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.68□□□□□ -2.3
USP9XQ93008 AC125611.2-201ENST00000551907 647 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AC091304.6-201ENST00000619761 202 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 SNORD108-201ENST00000459332 71 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.68□□□□□ -2.3
USP9XQ93008 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.68□□□□□ -2.3
USP9XQ93008 MIR4716-201ENST00000579628 84 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AC113368.1-201ENST00000603736 382 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AL118508.4-201ENST00000624142 1176 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 AC091812.1-201ENST00000432235 1948 ntBASIC0.68□□□□□ -2.3
USP9XQ93008 UBE2FP3-201ENST00000436366 524 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.67□□□□□ -2.3
USP9XQ93008 RPL30P14-201ENST00000482744 348 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 MTCO1P47-201ENST00000523889 1271 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.67□□□□□ -2.3
USP9XQ93008 MIR4514-201ENST00000581410 57 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 AC009974.1-201ENST00000608881 455 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 AC004943.3-201ENST00000624116 600 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.67□□□□□ -2.3
USP9XQ93008 SNORD114-2-201ENST00000363953 78 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.67□□□□□ -2.3
USP9XQ93008 RPL21P104-201ENST00000464143 478 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 SNORA48.11-201ENST00000517015 89 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 SNORA31.25-201ENST00000517242 134 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 RPS15AP11-201ENST00000594193 385 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 AC097372.5-201ENST00000623665 376 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 AC080100.1-201ENST00000624239 5356 ntBASIC0.67□□□□□ -2.3
USP9XQ93008 SNORD118-201ENST00000363593 134 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 SNORD56-201ENST00000413522 71 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 NUP35P2-201ENST00000416748 943 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.66□□□□□ -2.3
USP9XQ93008 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.66□□□□□ -2.3
USP9XQ93008 LSM1P1-201ENST00000438629 273 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.66□□□□□ -2.3
USP9XQ93008 AC008676.3-201ENST00000521237 435 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 MIR5194-201ENST00000582634 120 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 RNA5SP98-201ENST00000363158 137 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 SNORA23-201ENST00000365128 182 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.66□□□□□ -2.3
USP9XQ93008 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.66□□□□□ -2.3
USP9XQ93008 CASP1P1-201ENST00000526345 212 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 DUXAP4-201ENST00000603046 613 ntBASIC0.66□□□□□ -2.3
USP9XQ93008 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
USP9XQ93008 VPS26BP1-201ENST00000417155 755 ntBASIC0.65□□□□□ -2.3
USP9XQ93008 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.65□□□□□ -2.3
USP9XQ93008 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.65□□□□□ -2.3
USP9XQ93008 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
USP9XQ93008 Y_RNA.447-201ENST00000384184 113 ntBASIC0.65□□□□□ -2.31
USP9XQ93008 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.65□□□□□ -2.31
USP9XQ93008 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.65□□□□□ -2.31
USP9XQ93008 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.65□□□□□ -2.31
USP9XQ93008 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.65□□□□□ -2.31
USP9XQ93008 MIR4458-201ENST00000578872 75 ntBASIC0.65□□□□□ -2.31
USP9XQ93008 AP000811.1-201ENST00000603803 651 ntBASIC0.65□□□□□ -2.31
USP9XQ93008 AC106028.5-201ENST00000610332 395 ntBASIC0.65□□□□□ -2.31
USP9XQ93008 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.65□□□□□ -2.31
USP9XQ93008 AC114546.3-201ENST00000623582 1734 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms