Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 NDUFS5P4-201ENST00000412983 318 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 USP9YP8-201ENST00000441913 500 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC106872.3-201ENST00000495104 446 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 MTND2P31-201ENST00000512602 616 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNA5SP290-201ENST00000517133 127 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 NACAP3-201ENST00000552100 481 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AL132657.2-201ENST00000564417 358 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC104072.1-201ENST00000568817 668 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 MIR5089-201ENST00000580047 84 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 OR4K7P-201ENST00000580232 945 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 MIR3945-201ENST00000581853 98 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AP000403.1-201ENST00000603349 851 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC025588.2-201ENST00000604851 466 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC093673.2-201ENST00000609674 331 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 TUG1_2.1-201ENST00000614234 87 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC245884.12-201ENST00000615364 59 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AP003476.1-201ENST00000623984 516 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 MIR7157-201ENST00000635801 60 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC110491.1-201ENST00000562191 2010 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AC010889.1-201ENST00000566193 2666 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNU6-432P-201ENST00000384196 109 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RNU6-1328P-201ENST00000410938 106 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 BPY2DP-201ENST00000422208 265 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC007560.1-201ENST00000426912 237 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC098831.1-201ENST00000440661 216 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 MTND5P14-201ENST00000441481 1267 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RPL23AP7-203ENST00000449021 469 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 ANKRD26P4-201ENST00000455755 950 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RN7SL429P-201ENST00000479090 223 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RN7SL489P-201ENST00000486185 223 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RN7SL327P-201ENST00000488659 223 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC113347.3-201ENST00000509113 148 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC007151.1-201ENST00000572774 483 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AF038458.1-201ENST00000588406 262 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC112220.2-201ENST00000605513 533 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RNU6-1192P-201ENST00000612197 107 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RN7SL853P-201ENST00000617250 223 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 RNU6-489P-201ENST00000618289 107 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC092447.10-201ENST00000620607 1652 ntBASIC1.8□□□□□ -2.12
ZIC4Q8N9L1 AC092881.1-201ENST00000638218 2733 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 SNRPEP9-201ENST00000436794 238 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 MTCO2P25-201ENST00000447065 681 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC013267.1-201ENST00000458227 267 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC025033.1-201ENST00000463883 194 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC092902.1-201ENST00000486999 259 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC016550.1-201ENST00000505348 785 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC110760.3-202ENST00000515177 371 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 RNU6-150P-201ENST00000516237 95 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 HSPE1P18-201ENST00000517602 280 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AL512347.1-201ENST00000566420 503 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 MIR3199-1-201ENST00000582434 88 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 RPS15AP11-201ENST00000594193 385 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC007349.4-201ENST00000608114 532 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AL589743.7-201ENST00000612637 233 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC126544.2-201ENST00000625174 749 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 MIR3199-2-201ENST00000636243 86 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
ZIC4Q8N9L1 AC104454.1-201ENST00000421341 1401 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 RNU4-51P-201ENST00000364206 140 ntBASIC1.78□□□□□ -2.12
ZIC4Q8N9L1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms