Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL360271.2-201ENST00000447710 161 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 GSTA11P-201ENST00000452866 669 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 BTF3P15-201ENST00000455606 336 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 RNU7-187P-201ENST00000458985 68 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 HSPE1P6-201ENST00000479457 291 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 SNORA25.10-201ENST00000515926 124 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 RNA5SP519-201ENST00000516480 119 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AP003730.1-201ENST00000524605 285 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 CYCSP29-201ENST00000533731 318 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 TRAV8-5-201ENST00000537369 341 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AL117187.1-201ENST00000555482 181 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AC008269.2-201ENST00000561915 1105 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 FAM60BP-201ENST00000578364 658 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 MIR5692A1-201ENST00000580523 69 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AC011494.1-201ENST00000596454 237 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 AC010201.1-201ENST00000605051 540 ntBASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM48Q8IWZ4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC018529.3-201ENST00000624212 2254 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 UBE2L2-201ENST00000254302 429 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RNU1-14P-201ENST00000362759 152 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 Y_RNA.151-201ENST00000363566 112 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 Y_RNA.252-201ENST00000364556 101 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC117470.1-201ENST00000381974 330 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 Y_RNA.496-201ENST00000384444 101 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 SNORD73A-201ENST00000386062 65 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 HMGB1P9-201ENST00000429856 646 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RPL23AP46-201ENST00000438548 490 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RPS26P28-201ENST00000470806 348 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 SUMO2P6-201ENST00000505273 288 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RNA5SP154-201ENST00000516193 111 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RNU6-764P-201ENST00000516396 105 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 RNA5SP471-201ENST00000516971 106 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 MIR2116-201ENST00000517221 80 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC090151.1-201ENST00000520784 730 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 LINC00901.1-201ENST00000617252 152 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC087588.2-201ENST00000617667 426 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AL162373.1-201ENST00000620433 407 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AL031601.2-202ENST00000622650 282 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 Z99571.1-201ENST00000636677 394 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC119674.1-207ENST00000641355 633 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 AC093535.2-201ENST00000624769 2326 ntBASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM48Q8IWZ4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AL592182.3-201ENST00000642132 3304 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 RNU4-6P-201ENST00000410804 122 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AC097713.2-201ENST00000430199 356 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 RPL23AP50-201ENST00000434149 455 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 RNU7-138P-201ENST00000459479 64 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AC022493.2-201ENST00000506122 481 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms