Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LRRC77P-213ENST00000637727 880 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 OR5H6-203ENST00000642105 978 ntBASIC3.61□□□□□ -1.83
HERC6Q8IVU3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HERC6Q8IVU3 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 RNU6-456P-201ENST00000384493 107 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 RN7SKP285-201ENST00000410137 318 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 Y_RNA.599-201ENST00000410489 109 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 RNU2-66P-201ENST00000410650 161 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL031779.1-201ENST00000415663 330 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL358934.1-201ENST00000432346 324 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MTND1P34-201ENST00000438556 671 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MTND4P25-201ENST00000441039 533 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 PIGFP3-201ENST00000441918 722 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MTATP6P30-201ENST00000443540 664 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC079448.1-201ENST00000449377 373 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC007182.2-201ENST00000489251 402 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC079382.1-201ENST00000493346 557 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 TTC39CP1-201ENST00000512513 755 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC090572.1-201ENST00000519251 160 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 CASP1P1-201ENST00000526345 212 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC245505.1-201ENST00000556398 224 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MIR5047-201ENST00000579212 100 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MIR3609-201ENST00000582661 80 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 DPPA3P3-201ENST00000603842 430 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL136363.1-201ENST00000605349 337 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL365204.3-201ENST00000612448 685 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AL138880.2-201ENST00000616214 239 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 AC136475.10-201ENST00000620253 385 ntBASIC3.6□□□□□ -1.83
HERC6Q8IVU3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
HERC6Q8IVU3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RNU6-181P-201ENST00000363225 107 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RNU6-39P-201ENST00000384344 107 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RN7SKP284-201ENST00000411002 343 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 Z85995.1-201ENST00000415547 335 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RPL35AP12-201ENST00000425362 338 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC010975.2-201ENST00000427781 588 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RPS20P5-201ENST00000434808 360 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RN7SL863P-201ENST00000462370 296 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC107401.1-201ENST00000503426 685 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 PCBP2P3-201ENST00000509726 843 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 SNORA31.3-201ENST00000516029 96 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RNU6-445P-201ENST00000516949 107 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RN7SKP60-201ENST00000516985 239 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 RNA5SP290-201ENST00000517133 127 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AP002404.1-201ENST00000532005 451 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC009063.1-201ENST00000563342 702 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 HMGB1P6-201ENST00000569046 646 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC010653.1-201ENST00000571108 881 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC068790.6-201ENST00000602558 258 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC078795.2-201ENST00000602835 1252 ntBASIC3.59□□□□□ -1.83
HERC6Q8IVU3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.59□□□□□ -1.83
HERC6Q8IVU3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms