Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 RNA5SP88-201ENST00000365560 109 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 RNU2-52P-201ENST00000410680 190 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC244035.1-201ENST00000430042 390 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 RPS15AP5-201ENST00000436276 388 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 IFNA11P-201ENST00000446352 526 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 RNU7-59P-201ENST00000459101 61 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC055855.1-201ENST00000489563 579 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC105252.1-201ENST00000503089 286 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AL359212.1-201ENST00000556608 614 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 Z82209.1-201ENST00000422141 2135 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 AL137003.2-201ENST00000606924 2538 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 Y_RNA.245-201ENST00000364493 95 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL139397.2-201ENST00000404529 772 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL359634.1-202ENST00000404721 284 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 RNU6-584P-201ENST00000410350 95 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 USP9YP13-201ENST00000417797 480 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 ARL5AP4-201ENST00000430731 512 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 FCF1P1-201ENST00000432690 571 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 SNRPEP9-201ENST00000436794 238 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 LARP1BP3-201ENST00000437229 869 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC005094.1-201ENST00000440420 368 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC013267.1-201ENST00000458227 267 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 GTF2IP9-201ENST00000502460 301 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC097462.2-201ENST00000504623 481 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC026436.1-201ENST00000510537 270 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AP004247.1-201ENST00000531556 1289 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC093012.1-202ENST00000549403 582 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 VN1R90P-201ENST00000595717 726 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC245884.10-201ENST00000597355 337 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 ATP1B3P1-201ENST00000605365 821 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC004805.2-201ENST00000605382 482 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AC068057.2-201ENST00000624047 895 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 AL136313.1-201ENST00000624804 202 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 MIR1291-201ENST00000627649 87 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 CU459211.1-201ENST00000635667 749 ntBASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUDCD3Q8IVD9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 OR5H15-201ENST00000383696 930 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 VPS26BP1-201ENST00000417155 755 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 ELOCP14-201ENST00000428070 331 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AL035407.1-201ENST00000429211 571 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 MTND1P28-201ENST00000435623 950 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 ELOCP7-201ENST00000439968 331 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AL831737.1-201ENST00000441288 271 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 CECR9-201ENST00000453421 199 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC104435.1-201ENST00000483483 166 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 LINC00888-204ENST00000487386 421 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms