Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-714P-201ENST00000516963 103 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.29□□□□□ -1.88
USP43Q70EL4 FO082796.1-201ENST00000523795 183 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 PSMA2P1-201ENST00000526365 646 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.29□□□□□ -1.88
USP43Q70EL4 YPEL5P3-201ENST00000547227 352 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.29□□□□□ -1.88
USP43Q70EL4 SUB1P2-201ENST00000556401 297 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 MIR3167-201ENST00000579623 85 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.29□□□□□ -1.88
USP43Q70EL4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.29□□□□□ -1.88
USP43Q70EL4 AC011468.4-201ENST00000603942 409 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 AC016925.2-201ENST00000605108 242 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 AL080274.1-201ENST00000605565 220 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
USP43Q70EL4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.29□□□□□ -1.88
USP43Q70EL4 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
USP43Q70EL4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP43Q70EL4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
USP43Q70EL4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.29□□□□□ -1.88
USP43Q70EL4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.29□□□□□ -1.88
USP43Q70EL4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USP43Q70EL4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
USP43Q70EL4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL672296.1-201ENST00000427780 2158 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 MTND4P35-201ENST00000604257 1375 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP43Q70EL4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
USP43Q70EL4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP43Q70EL4 RPL7P26-201ENST00000333817 754 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 SNORA31-201ENST00000362607 130 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 Y_RNA.231-201ENST00000364358 102 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 SNORA69-201ENST00000383895 132 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 RNU6-1026P-201ENST00000384465 108 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 RNA5SP424-201ENST00000390988 115 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 RNU6-1158P-201ENST00000391167 107 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 TXNP7-201ENST00000406296 293 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 MIR548F4-201ENST00000408515 105 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 RNU4-6P-201ENST00000410804 122 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC127391.1-201ENST00000411737 98 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.28□□□□□ -1.88
USP43Q70EL4 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 MTATP6P18-201ENST00000417994 673 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.28□□□□□ -1.88
USP43Q70EL4 SRIP2-201ENST00000428470 166 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.28□□□□□ -1.88
USP43Q70EL4 MTCYBP9-201ENST00000431021 303 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL606489.2-201ENST00000433886 234 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 IFNA20P-201ENST00000436840 528 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
USP43Q70EL4 AL731563.1-201ENST00000442202 214 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.28□□□□□ -1.88
USP43Q70EL4 AL136380.1-201ENST00000447970 162 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.28□□□□□ -1.88
USP43Q70EL4 SUMO1P2-201ENST00000452524 304 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL162395.1-201ENST00000457882 422 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC104563.1-201ENST00000476147 376 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC108860.1-201ENST00000484521 383 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC093663.1-201ENST00000497190 394 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC078918.1-201ENST00000498515 228 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 KLHL2P1-201ENST00000508691 521 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC114797.1-201ENST00000514003 728 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 RNU4-60P-201ENST00000517239 135 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.28□□□□□ -1.88
USP43Q70EL4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.28□□□□□ -1.88
USP43Q70EL4 AC123904.2-201ENST00000548059 300 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL117187.1-201ENST00000555482 181 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.28□□□□□ -1.88
USP43Q70EL4 MIR4742-201ENST00000581069 85 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 MIR3118-1-201ENST00000581787 76 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL353997.4-201ENST00000586196 166 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.28□□□□□ -1.88
USP43Q70EL4 HSPE1P14-201ENST00000605812 302 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.28□□□□□ -1.88
USP43Q70EL4 AL133173.2-201ENST00000614270 90 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC110801.1-201ENST00000623590 212 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AC090617.10-201ENST00000624308 134 ntBASIC3.28□□□□□ -1.88
USP43Q70EL4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.28□□□□□ -1.88
USP43Q70EL4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.28□□□□□ -1.88
USP43Q70EL4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
USP43Q70EL4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
USP43Q70EL4 AC068647.1-201ENST00000489539 2265 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 FAM91A3P-201ENST00000456826 2544 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
USP43Q70EL4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
USP43Q70EL4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
USP43Q70EL4 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 RNU6-639P-201ENST00000384074 107 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 AC016769.3-201ENST00000396562 315 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 AL031679.1-201ENST00000400616 525 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 RNU6-373P-201ENST00000411247 98 ntBASIC3.27□□□□□ -1.89
USP43Q70EL4 RAB9AP3-201ENST00000412737 573 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms