Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SNORA4.3-201ENST00000365564 137 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 AC118282.2-201ENST00000508739 374 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
VPS13CQ709C8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS13CQ709C8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.48□□□□□ -2.33
VPS13CQ709C8 AC099654.7-201ENST00000635788 2127 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 RNU1-98P-201ENST00000458992 160 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
VPS13CQ709C8 AL139344.1-201ENST00000605228 195 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 AC009812.4-201ENST00000569134 1805 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 RNU6-1305P-201ENST00000364353 104 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 RNU6-48P-201ENST00000384161 107 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 CISD1P1-201ENST00000393907 327 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.48□□□□□ -2.33
VPS13CQ709C8 MTND4LP24-201ENST00000572277 291 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 MTCO3P24-201ENST00000572729 782 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 AC023932.2-201ENST00000603176 175 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 AC000123.2-201ENST00000623124 461 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.48□□□□□ -2.33
VPS13CQ709C8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VPS13CQ709C8 MIR17-201ENST00000385012 84 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VPS13CQ709C8 FO393413.1-201ENST00000402892 195 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC244453.4-201ENST00000419150 388 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC246680.2-201ENST00000422106 389 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 MTND4LP3-201ENST00000468320 276 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.47□□□□□ -2.33
VPS13CQ709C8 CD24P2-201ENST00000565486 219 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC090425.2-201ENST00000608818 501 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC006001.4-201ENST00000622243 395 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC013244.3-201ENST00000605614 388 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC114546.3-201ENST00000623582 1734 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 SNORD95.1-201ENST00000364099 68 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 MTND3P24-201ENST00000506306 329 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC084373.1-201ENST00000603311 235 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 AC079597.1-201ENST00000624306 508 ntBASIC0.47□□□□□ -2.33
VPS13CQ709C8 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS13CQ709C8 HMGN2P13-201ENST00000476476 274 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 NBEAP1-201ENST00000554452 979 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 MIR518A2-201ENST00000384966 87 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 RAB9AP5-201ENST00000437794 597 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 C1DP3-201ENST00000455013 423 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 AC020699.1-201ENST00000505161 445 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VPS13CQ709C8 AC084757.1-201ENST00000559987 490 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 AC004817.2-201ENST00000561794 651 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VPS13CQ709C8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.46□□□□□ -2.34
VPS13CQ709C8 AL161788.1-201ENST00000441805 169 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.46□□□□□ -2.34
VPS13CQ709C8 RNU6-970P-201ENST00000516312 107 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 NDUFS5P6-201ENST00000529136 295 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 AP003327.1-201ENST00000529684 127 ntBASIC0.46□□□□□ -2.34
VPS13CQ709C8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.46□□□□□ -2.34
VPS13CQ709C8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS13CQ709C8 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 AC009296.1-201ENST00000443146 155 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 RBM43P1-201ENST00000476891 1081 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
VPS13CQ709C8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
VPS13CQ709C8 RNU6-30P-201ENST00000384561 107 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 RPL23AP47-201ENST00000408017 460 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.45□□□□□ -2.34
VPS13CQ709C8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 HMGN2P9-201ENST00000476875 229 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.45□□□□□ -2.34
VPS13CQ709C8 AL138976.2-201ENST00000563989 694 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 AC012557.2-201ENST00000605919 418 ntBASIC0.45□□□□□ -2.34
VPS13CQ709C8 RPL31P52-201ENST00000407532 367 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 RSL24D1P8-201ENST00000434442 492 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 UBBP3-201ENST00000445497 241 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 PTENP1-201ENST00000447117 1215 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC109927.2-201ENST00000506416 303 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 RNA5SP67-201ENST00000516422 131 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AL163153.1-201ENST00000554223 283 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC087359.1-201ENST00000508335 1740 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
VPS13CQ709C8 SNORA9.1-201ENST00000362412 131 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 CCNB2P1-201ENST00000399411 1150 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC093716.1-201ENST00000435923 377 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 Z80107.1-201ENST00000436830 412 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC117454.1-201ENST00000491120 168 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 Y_RNA.757-201ENST00000578934 114 ntBASIC0.44□□□□□ -2.34
VPS13CQ709C8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.44□□□□□ -2.34
VPS13CQ709C8 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms