Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL355365.1-201ENST00000616480 294 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 Y_RNA.132-201ENST00000363421 102 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-371P-201ENST00000364283 108 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 HSPE1P8-201ENST00000406997 288 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 RPL7P28-201ENST00000437739 740 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-1016P-201ENST00000516689 94 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-914P-201ENST00000516749 109 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 SNORA31.20-201ENST00000517111 133 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AF186190.1-201ENST00000517470 480 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AC023632.4-201ENST00000517783 191 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AP000942.4-201ENST00000604811 241 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AC116312.1-201ENST00000606841 314 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AC107294.1-201ENST00000609524 467 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 ATP5A1P2-202ENST00000616464 443 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 MIR6875-201ENST00000617506 72 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AL360181.4-201ENST00000621752 134 ntBASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RUFY4Q6ZNE9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SNORD3E-201ENST00000362899 217 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 Y_RNA.112-201ENST00000363250 102 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SNORA63C-201ENST00000364578 129 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-629P-201ENST00000384061 103 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 Y_RNA.534-201ENST00000384599 112 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SNORD66.1-201ENST00000391230 76 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SNORA75.4-201ENST00000391278 119 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 EI24P1-201ENST00000416584 867 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RPL21P109-201ENST00000422213 475 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RPL7P2-201ENST00000427639 268 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AL359672.1-201ENST00000442302 409 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC108860.1-201ENST00000484521 383 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RPS15AP34-201ENST00000487776 387 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC116337.1-201ENST00000509680 687 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 TBCAP3-201ENST00000512475 312 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC069113.1-201ENST00000517763 267 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-323P-201ENST00000521915 107 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC022968.1-201ENST00000567372 442 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 MIR3921-201ENST00000577308 85 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RN7SL703P-201ENST00000578485 302 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC012119.1-201ENST00000603184 222 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC244517.12-201ENST00000623581 663 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 BMS1P21-201ENST00000634565 365 ntBASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RUFY4Q6ZNE9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 Y_RNA.145-201ENST00000363527 102 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-214P-201ENST00000384130 107 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC245054.2-201ENST00000415639 319 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC006946.1-201ENST00000429106 328 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC073063.1-201ENST00000434352 607 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AL451050.1-201ENST00000450126 415 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC117503.1-201ENST00000472241 394 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC092451.1-201ENST00000480211 153 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 APOOP4-201ENST00000513530 597 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC006064.5-201ENST00000541782 248 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 RPL23AP87-202ENST00000573039 466 ntBASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.66□□□□□ -1.66
RUFY4Q6ZNE9 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms