Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC010615.1-201ENST00000594254 1764 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.214-201ENST00000364201 112 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 SNORA71.2-201ENST00000364941 134 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.350-201ENST00000365409 98 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 SNORA36C-201ENST00000384289 132 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.483-201ENST00000384380 101 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 RNU4-70P-201ENST00000384579 139 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 MIR1302-6-201ENST00000408466 90 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 RNA5SP104-201ENST00000410989 118 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC119751.6-201ENST00000416712 186 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC140479.3-201ENST00000418944 1126 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 PGBD4P6-201ENST00000421501 610 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 ELOCP20-201ENST00000422460 345 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 RPL7P2-201ENST00000427639 268 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC073910.1-201ENST00000445047 438 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC006499.6-201ENST00000511169 607 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 IFITM8P-201ENST00000522529 394 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC004805.2-201ENST00000605382 482 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC123912.5-201ENST00000605470 343 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC103858.2-201ENST00000621471 543 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 AC010300.1-201ENST00000600671 5134 ntBASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF111Q6ZNA4 MTND5P27-201ENST00000428871 1720 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AL450326.2-201ENST00000421913 1962 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 UBE2L2-201ENST00000254302 429 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.26-201ENST00000362539 101 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNU6-512P-201ENST00000364438 103 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNU6-806P-201ENST00000365147 105 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNU6-933P-201ENST00000384424 107 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AL353621.1-201ENST00000418219 243 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MTATP6P4-201ENST00000427725 675 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 HSPD1P21-201ENST00000436541 245 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MTND2P29-201ENST00000438595 412 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RPS3AP46-201ENST00000448352 682 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AL451050.1-201ENST00000450126 415 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 SNORD127-201ENST00000458892 86 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 HMGN2P13-201ENST00000476476 274 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC008716.1-201ENST00000511084 513 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 APOOP4-201ENST00000513530 597 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNU1-86P-201ENST00000516108 154 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.687-201ENST00000516558 91 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNU1-107P-201ENST00000516617 154 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNU7-4P-201ENST00000516961 62 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RNA5SP471-201ENST00000516971 106 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 HSPE1P20-201ENST00000538133 289 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 TRAV32-201ENST00000553993 340 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC091178.1-203ENST00000584586 279 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 HMGB2P1-201ENST00000591146 634 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 RAC1P9-201ENST00000604990 392 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AL121917.1-203ENST00000605534 577 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MIR1244-1-201ENST00000612829 85 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC034102.8-201ENST00000615146 484 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MIR1244-3-201ENST00000635744 85 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MIR1244-2-201ENST00000636449 85 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 MIR1244-4-202ENST00000636813 85 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC018529.3-201ENST00000624212 2254 ntBASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF111Q6ZNA4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 Y_RNA.64-201ENST00000362845 102 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms