Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AL031176.1-201ENST00000604554 466 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AC107214.2-201ENST00000608204 634 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AL161423.1-201ENST00000613700 262 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AL590808.1-201ENST00000618696 141 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AL162373.1-201ENST00000620433 407 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AC004009.2-201ENST00000623016 728 ntBASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.84□□□□□ -2.11
SMARCD3Q6STE5 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.12
SMARCD3Q6STE5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 CCT4P2-201ENST00000233836 1548 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 ELF2P3-201ENST00000445099 1506 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 RNU4-92P-201ENST00000363783 136 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 RNU6-343P-201ENST00000364709 104 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 RN7SKP226-201ENST00000364912 300 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 RNU6-1122P-201ENST00000384449 107 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 RPL17P12-201ENST00000413391 526 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 ELOCP9-201ENST00000418624 239 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 TIMM9P2-201ENST00000419324 266 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 BEND7P1-201ENST00000422058 457 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AL356320.1-201ENST00000429616 163 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 MTND2P5-201ENST00000432656 1006 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AL512844.2-201ENST00000433990 593 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 THAP5P1-201ENST00000439089 262 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 MTCO2P25-201ENST00000447065 681 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 MTCO3P11-201ENST00000455103 774 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC090453.1-201ENST00000495560 436 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC020699.1-201ENST00000505161 445 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 SUMO2P6-201ENST00000505273 288 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC104090.1-201ENST00000506341 1171 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC006499.2-201ENST00000513470 337 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC093677.1-201ENST00000514414 678 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AP005902.1-201ENST00000521358 186 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 HSPE1P3-201ENST00000559254 309 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC025588.2-201ENST00000604851 466 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC006270.3-201ENST00000605967 1036 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AP000240.1-201ENST00000609910 452 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 DUXAP9-208ENST00000622815 614 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC231657.1-201ENST00000624313 397 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 MTND4P27-201ENST00000450813 1354 ntBASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SMARCD3Q6STE5 AC080128.1-201ENST00000474389 1917 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 Y_RNA.311-201ENST00000365068 96 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 SNORA72.3-201ENST00000365074 132 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 RNU6-83P-201ENST00000384568 112 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 RNU6-878P-201ENST00000384578 110 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 RNU6-952P-201ENST00000391164 108 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AL139156.1-201ENST00000412785 841 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AL139413.1-201ENST00000421309 217 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 RPS25P9-201ENST00000435591 252 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 EEF1E1P1-201ENST00000446998 430 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AL353691.1-201ENST00000451332 387 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 BX322784.1-201ENST00000455793 1077 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 RNU7-136P-201ENST00000458819 69 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 MTND1P16-201ENST00000465177 898 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 COX7A2P2-201ENST00000505291 250 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC110760.3-202ENST00000515177 371 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 SCARNA17.1-201ENST00000516211 143 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 RNU6-150P-201ENST00000516237 95 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 SCARNA17.2-201ENST00000516334 143 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 IGKV3-31-201ENST00000523109 329 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 OR11H5P-201ENST00000554039 926 ntBASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCD3Q6STE5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms