Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 EEF1B2P4-201ENST00000551398 348 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC108706.1-201ENST00000611053 297 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 ZNF33CP-201ENST00000432492 2030 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 RPL23AP32-201ENST00000395315 459 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 RNU6-920P-201ENST00000410926 92 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 MRPS36P1-201ENST00000421291 307 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC233728.2-201ENST00000425348 757 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 RPS27P26-201ENST00000494583 239 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AK3P2-201ENST00000507976 429 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 RNU11-2P-201ENST00000516898 142 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC104229.1-201ENST00000561364 255 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 FCF1P2-201ENST00000415284 583 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 AL591704.2-201ENST00000421658 181 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 AC023141.11-201ENST00000508864 202 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 MIR338-201ENST00000636369 67 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 RPL30P6-201ENST00000475925 342 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 RPL31P41-201ENST00000477967 372 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 AC022079.2-201ENST00000619739 566 ntBASIC0.49□□□□□ -2.33
VPS13DQ5THJ4 ELL2P3-201ENST00000457883 1602 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 RNU6-1072P-201ENST00000384703 107 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 RNU6-443P-201ENST00000384780 107 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC069277.2-201ENST00000454211 432 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 RNU4-77P-201ENST00000516692 156 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 RRN3P3-201ENST00000549207 578 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 BNIP3P7-201ENST00000605641 516 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC008379.1-201ENST00000463655 464 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 MIR4658-201ENST00000584344 65 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 HMGN1P30-201ENST00000589286 268 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 GAS5-AS1-201ENST00000602767 694 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC013268.2-201ENST00000420753 337 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC104806.1-201ENST00000508720 308 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC013244.2-201ENST00000603396 103 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC007792.1-201ENST00000623023 402 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 AC068787.1-201ENST00000623908 691 ntBASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
VPS13DQ5THJ4 RNU6-19P-201ENST00000384718 107 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 TRGV6-201ENST00000417928 299 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 MTCO3P35-201ENST00000485582 781 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AC008834.1-201ENST00000511612 175 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AC112198.4-201ENST00000515450 351 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AC092648.1-201ENST00000425870 423 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AL035666.1-201ENST00000446195 348 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 SNORA31.18-201ENST00000517043 134 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 RNA5SP310-201ENST00000459084 116 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AC139453.3-201ENST00000493276 369 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 SNORA44.1-201ENST00000517031 108 ntBASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
VPS13DQ5THJ4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 RPL27AP8-201ENST00000424277 446 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 SNORA48.11-201ENST00000517015 89 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AL627230.5-201ENST00000619807 58 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 Y_RNA.303-201ENST00000364998 94 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AL356131.1-201ENST00000405826 414 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 HMGB1P9-201ENST00000429856 646 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 RPL23AP6-201ENST00000446637 472 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AC003001.2-201ENST00000616294 831 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AC067863.3-201ENST00000624172 122 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 MTND5P11-201ENST00000511037 1812 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AP001350.1-201ENST00000601906 1524 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 RNA5SP511-201ENST00000410487 115 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 RNU6-955P-201ENST00000410497 104 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 RPL30P11-201ENST00000495304 339 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 APOOP3-201ENST00000536787 586 ntBASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.46□□□□□ -2.34
VPS13DQ5THJ4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC098591.2-201ENST00000510152 315 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC133485.1-201ENST00000567176 124 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AC138907.6-201ENST00000568401 126 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AL355812.1-201ENST00000603215 216 ntBASIC0.45□□□□□ -2.34
VPS13DQ5THJ4 AP000654.2-201ENST00000605633 586 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms