Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AP000238.1-201ENST00000608759 426 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AL121652.1-201ENST00000608851 448 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 MIR6845-201ENST00000613182 61 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 RNU2-41P-201ENST00000410991 178 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 SFR1P2-201ENST00000421841 730 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AC241584.1-201ENST00000438469 1241 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 SUMO2P2-201ENST00000456482 255 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 SNORD53B-201ENST00000577887 78 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AC018638.7-201ENST00000605836 1114 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC58Q4VC31 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
CCDC58Q4VC31 RNU6-1339P-201ENST00000363574 91 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 MIR30A-201ENST00000385092 71 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 MIR1323-201ENST00000408090 73 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 EIF4EP2-201ENST00000422816 654 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AL513185.2-201ENST00000425543 193 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 THAP5P1-201ENST00000439089 262 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 SNRPGP13-201ENST00000442212 177 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 RFC5P1-201ENST00000454419 874 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 RNA5SP57-201ENST00000459463 123 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 MTND4P2-201ENST00000507767 1203 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 ZNF705CP-201ENST00000530515 889 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC007151.1-201ENST00000572774 483 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AP003973.1-201ENST00000604639 691 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC009233.1-201ENST00000616477 371 ntBASIC1.24□□□□□ -2.21
CCDC58Q4VC31 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
CCDC58Q4VC31 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 MIR424-201ENST00000362227 98 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 SNORA70B-201ENST00000384210 135 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 MIR514A1-201ENST00000385133 98 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 MIR634-201ENST00000385208 97 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 SNORA67.6-201ENST00000391093 99 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC007677.1-201ENST00000445757 515 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 HMGN2P23-201ENST00000456759 269 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC008481.1-201ENST00000463278 396 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 TRBV1-201ENST00000476502 284 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC098799.1-201ENST00000504752 800 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 SNORA4.4-201ENST00000515921 135 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AP004247.1-201ENST00000531556 1289 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 MIR4765-201ENST00000585007 77 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 MIR6852-201ENST00000621699 66 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 MIR7843-201ENST00000622274 79 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC091953.2-201ENST00000623979 160 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CCDC58Q4VC31 AC087821.2-201ENST00000637086 450 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 OR4G11P-202ENST00000642116 1414 ntBASIC1.23□□□□□ -2.21
CCDC58Q4VC31 RNU6-486P-201ENST00000363116 107 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 SNORA26.9-201ENST00000391322 122 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 BEND7P1-201ENST00000422058 457 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AL121601.2-201ENST00000438019 707 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AP000949.1-201ENST00000438328 629 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 MTCO3P17-201ENST00000443775 513 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AC093801.2-201ENST00000503966 1050 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AC022483.1-201ENST00000514020 567 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 RNU6-295P-201ENST00000516901 104 ntBASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC58Q4VC31 AP003400.6-201ENST00000624698 740 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms