Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX4Q33E94 RPS3AP14-201ENST00000483907 780 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX4Q33E94 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RFX4Q33E94 IGLV3-17-201ENST00000519099 244 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.26□□□□□ -2.05
RFX4Q33E94 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX4Q33E94 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RFX4Q33E94 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.26□□□□□ -2.05
RFX4Q33E94 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFX4Q33E94 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX4Q33E94 GLYCAM1-201ENST00000546596 285 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.26□□□□□ -2.05
RFX4Q33E94 TRAV28-201ENST00000557548 323 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 MIR4293-201ENST00000584305 78 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 NRBF2P5-201ENST00000603087 788 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC007619.2-201ENST00000605743 379 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC007038.2-201ENST00000608095 740 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX4Q33E94 MTND1P37-201ENST00000636562 264 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RFX4Q33E94 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX4Q33E94 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.25□□□□□ -2.05
RFX4Q33E94 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX4Q33E94 AL139276.1-201ENST00000311910 1001 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 MIR21-201ENST00000362134 72 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 Y_RNA.46-201ENST00000362695 102 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 RNU6-859P-201ENST00000362728 107 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AL139397.2-201ENST00000404529 772 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 Z92545.1-201ENST00000411782 234 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC007064.1-201ENST00000412238 351 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 VPS26BP1-201ENST00000417155 755 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC099548.1-201ENST00000421443 426 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AL590383.1-201ENST00000428602 75 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC007919.1-201ENST00000429380 217 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AL714022.1-201ENST00000439897 151 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AL445687.1-201ENST00000439946 251 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 Z82210.1-201ENST00000440037 231 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC005094.1-201ENST00000440420 368 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AL049734.2-201ENST00000441066 616 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 PIGFP3-201ENST00000441918 722 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 DDX3P2-201ENST00000446138 111 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.25□□□□□ -2.05
RFX4Q33E94 MTCO1P42-201ENST00000457379 726 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC087588.1-201ENST00000462203 316 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC072039.1-201ENST00000477611 581 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC116337.2-201ENST00000477662 156 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RFX4Q33E94 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC097462.2-201ENST00000504623 481 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC113155.1-201ENST00000511141 769 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 RNU6-1129P-201ENST00000515964 104 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 RN7SKP132-201ENST00000516001 208 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 RNU6-1282P-201ENST00000516735 96 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 HMGN1P28-201ENST00000521340 364 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 MTATP6P15-201ENST00000527233 835 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC078814.3-201ENST00000553036 491 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AP001004.1-201ENST00000582468 324 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AP000403.1-201ENST00000603349 851 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 ATP1B3P1-201ENST00000605365 821 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC108747.1-201ENST00000609508 535 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RFX4Q33E94 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX4Q33E94 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC091965.5-201ENST00000624785 342 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AL136313.1-201ENST00000624804 202 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 AC097655.1-201ENST00000635075 318 ntBASIC2.25□□□□□ -2.05
RFX4Q33E94 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX4Q33E94 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RFX4Q33E94 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
RFX4Q33E94 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.24□□□□□ -2.05
RFX4Q33E94 OR5J1P-201ENST00000313544 939 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RNU6-223P-201ENST00000362830 107 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 SNORA68.1-201ENST00000364537 132 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RNU1-51P-201ENST00000365345 176 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RNU6-741P-201ENST00000383889 107 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RNU6-217P-201ENST00000384164 104 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 U8.14-201ENST00000390843 143 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RNU2-33P-201ENST00000410344 192 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AL513331.1-201ENST00000411908 397 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 RPL21P24-201ENST00000413752 448 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 USP9YP26-201ENST00000421008 661 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 COTL1P1-201ENST00000422309 375 ntBASIC2.24□□□□□ -2.05
RFX4Q33E94 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms