Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
GABPAQ06546 PABPC1P9-201ENST00000426076 1612 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
GABPAQ06546 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
GABPAQ06546 Y_RNA.169-201ENST00000363745 96 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 RNU6-553P-201ENST00000364047 96 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.87□□□□□ -1.95
GABPAQ06546 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
GABPAQ06546 RNA5SP252-201ENST00000391131 119 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL031577.2-201ENST00000404133 280 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 RNU4-53P-201ENST00000410828 140 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.87□□□□□ -1.95
GABPAQ06546 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.87□□□□□ -1.95
GABPAQ06546 USP9YP26-201ENST00000421008 661 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL365203.2-201ENST00000423444 196 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.87□□□□□ -1.95
GABPAQ06546 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.87□□□□□ -1.95
GABPAQ06546 AC007919.1-201ENST00000429380 217 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.87□□□□□ -1.95
GABPAQ06546 AL512844.2-201ENST00000433990 593 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.87□□□□□ -1.95
GABPAQ06546 SNRPGP6-201ENST00000451124 220 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.87□□□□□ -1.95
GABPAQ06546 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GABPAQ06546 CDC42P4-201ENST00000510507 563 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 RNU6-1003P-201ENST00000517099 105 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 NRON-201ENST00000517270 370 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC025881.1-201ENST00000518851 512 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
GABPAQ06546 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.87□□□□□ -1.95
GABPAQ06546 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
GABPAQ06546 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL356432.3-201ENST00000568952 465 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC002545.1-201ENST00000592511 181 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC046143.2-201ENST00000609789 160 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC103710.1-201ENST00000610003 901 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC069234.5-201ENST00000611056 416 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AC027807.2-201ENST00000616099 408 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 MIR7844-201ENST00000616161 122 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL138880.2-201ENST00000616214 239 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 AL136313.1-201ENST00000624804 202 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 MIR1291-201ENST00000627649 87 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 OR5H6-203ENST00000642105 978 ntBASIC2.87□□□□□ -1.95
GABPAQ06546 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GABPAQ06546 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
GABPAQ06546 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GABPAQ06546 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GABPAQ06546 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
GABPAQ06546 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GABPAQ06546 ZNF658B-202ENST00000615961 3375 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
GABPAQ06546 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
GABPAQ06546 RNU5F-6P-201ENST00000362979 116 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 RNU5A-2P-201ENST00000384337 116 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 RN7SKP284-201ENST00000411002 343 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.86□□□□□ -1.95
GABPAQ06546 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 RPS6P15-201ENST00000431996 751 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.86□□□□□ -1.95
GABPAQ06546 AL049734.2-201ENST00000441066 616 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC118469.1-201ENST00000442943 488 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 CBWD4P-201ENST00000445695 655 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 KATNBL1P6-201ENST00000453433 915 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.86□□□□□ -1.95
GABPAQ06546 RPF2P2-201ENST00000504693 896 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GABPAQ06546 OR5BM1P-201ENST00000512021 366 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC114797.1-201ENST00000514003 728 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 RNU6-928P-201ENST00000516876 104 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 RNU6-64P-201ENST00000517119 105 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
GABPAQ06546 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC007536.1-201ENST00000533382 349 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AP002770.2-201ENST00000543613 532 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.86□□□□□ -1.95
GABPAQ06546 AC123904.2-201ENST00000548059 300 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 ROCK1P1-201ENST00000573767 549 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 WISP1-OT1-201ENST00000602893 642 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC105129.3-201ENST00000605455 485 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC245517.5-201ENST00000611529 162 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
GABPAQ06546 AL603755.1-201ENST00000619504 163 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 AC007494.3-201ENST00000624660 743 ntBASIC2.86□□□□□ -1.95
GABPAQ06546 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.86□□□□□ -1.95
GABPAQ06546 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.86□□□□□ -1.95
GABPAQ06546 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
GABPAQ06546 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
GABPAQ06546 AC007785.2-201ENST00000598627 1916 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 RNU6-533P-201ENST00000384144 107 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 AL139095.1-201ENST00000404326 391 ntBASIC2.85□□□□□ -1.95
GABPAQ06546 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.85□□□□□ -1.95
GABPAQ06546 USP12PX-201ENST00000432383 1057 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms