Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 Y_RNA.167-201ENST00000363735 109 ntBASIC3.47□□□□□ -1.85
RAE1P78406 SNORD81.2-201ENST00000365153 76 ntBASIC3.47□□□□□ -1.85
RAE1P78406 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 SNORA32.2-201ENST00000384049 122 ntBASIC3.47□□□□□ -1.85
RAE1P78406 Y_RNA.530-201ENST00000384587 101 ntBASIC3.47□□□□□ -1.85
RAE1P78406 Y_RNA.534-201ENST00000384599 112 ntBASIC3.47□□□□□ -1.85
RAE1P78406 U8.11-201ENST00000384699 133 ntBASIC3.47□□□□□ -1.85
RAE1P78406 U8.12-201ENST00000384701 133 ntBASIC3.47□□□□□ -1.85
RAE1P78406 RN7SKP156-201ENST00000410308 342 ntBASIC3.47□□□□□ -1.85
RAE1P78406 RNU2-71P-201ENST00000411395 189 ntBASIC3.47□□□□□ -1.85
RAE1P78406 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC091390.3-201ENST00000426478 338 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AL590383.1-201ENST00000428602 75 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC091390.1-201ENST00000433904 331 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 SCARNA18-201ENST00000459004 134 ntBASIC3.47□□□□□ -1.85
RAE1P78406 U8.18-201ENST00000459285 133 ntBASIC3.47□□□□□ -1.85
RAE1P78406 RPL37P6-201ENST00000460682 294 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC012181.1-201ENST00000479895 423 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AP001086.1-201ENST00000494882 321 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC026402.1-201ENST00000513642 170 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.47□□□□□ -1.85
RAE1P78406 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.47□□□□□ -1.85
RAE1P78406 RNU2-58P-201ENST00000516403 183 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 RANP9-201ENST00000519957 271 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 ATP5F1P5-201ENST00000526403 760 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC022690.1-201ENST00000526681 550 ntBASIC3.47□□□□□ -1.85
RAE1P78406 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 AC004024.1-201ENST00000549244 247 ntBASIC3.47□□□□□ -1.85
RAE1P78406 OR11H5P-201ENST00000554039 926 ntBASIC3.47□□□□□ -1.85
RAE1P78406 MIR3690-201ENST00000580266 75 ntBASIC3.47□□□□□ -1.85
RAE1P78406 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.47□□□□□ -1.85
RAE1P78406 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.47□□□□□ -1.85
RAE1P78406 MIR15A-201ENST00000607334 83 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC006023.2-201ENST00000609916 167 ntBASIC3.47□□□□□ -1.85
RAE1P78406 uc_338.5-201ENST00000611839 155 ntBASIC3.47□□□□□ -1.85
RAE1P78406 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 AP003400.5-201ENST00000624827 617 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AL359697.1-201ENST00000624879 587 ntBASIC3.47□□□□□ -1.85
RAE1P78406 AC068724.3-201ENST00000625906 87 ntBASIC3.47□□□□□ -1.85
RAE1P78406 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RAE1P78406 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.47□□□□□ -1.85
RAE1P78406 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.47□□□□□ -1.85
RAE1P78406 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RAE1P78406 HSPA8P4-201ENST00000511877 1920 ntBASIC3.46□□□□□ -1.85
RAE1P78406 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.46□□□□□ -1.86
RAE1P78406 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
RAE1P78406 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.46□□□□□ -1.86
RAE1P78406 CEP170P1-201ENST00000502249 4587 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC008568.2-201ENST00000623862 2313 ntBASIC3.46□□□□□ -1.86
RAE1P78406 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.46□□□□□ -1.86
RAE1P78406 UBE2L2-201ENST00000254302 429 ntBASIC3.46□□□□□ -1.86
RAE1P78406 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
RAE1P78406 Y_RNA.61-201ENST00000362835 102 ntBASIC3.46□□□□□ -1.86
RAE1P78406 Y_RNA.399-201ENST00000383955 105 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AL590704.1-201ENST00000402856 794 ntBASIC3.46□□□□□ -1.86
RAE1P78406 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.46□□□□□ -1.86
RAE1P78406 POLHP1-201ENST00000411806 470 ntBASIC3.46□□□□□ -1.86
RAE1P78406 MTND3P8-201ENST00000412909 339 ntBASIC3.46□□□□□ -1.86
RAE1P78406 USP9YP20-201ENST00000419224 558 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.46□□□□□ -1.86
RAE1P78406 AL365400.1-201ENST00000431854 640 ntBASIC3.46□□□□□ -1.86
RAE1P78406 TAAR7P-201ENST00000436141 242 ntBASIC3.46□□□□□ -1.86
RAE1P78406 IFNA20P-201ENST00000436840 528 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC008264.1-201ENST00000447612 367 ntBASIC3.46□□□□□ -1.86
RAE1P78406 RNU7-66P-201ENST00000459469 62 ntBASIC3.46□□□□□ -1.86
RAE1P78406 VN1R17P-201ENST00000472048 1090 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC084357.1-201ENST00000473404 255 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC112206.3-201ENST00000514578 389 ntBASIC3.46□□□□□ -1.86
RAE1P78406 RNU6-1038P-201ENST00000516516 104 ntBASIC3.46□□□□□ -1.86
RAE1P78406 RNU6-914P-201ENST00000516749 109 ntBASIC3.46□□□□□ -1.86
RAE1P78406 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.46□□□□□ -1.86
RAE1P78406 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.46□□□□□ -1.86
RAE1P78406 MTCO3P23-201ENST00000561363 289 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.46□□□□□ -1.86
RAE1P78406 AC106782.4-201ENST00000568264 210 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
RAE1P78406 MIR5685-201ENST00000579080 79 ntBASIC3.46□□□□□ -1.86
RAE1P78406 MIR4742-201ENST00000581069 85 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC098826.3-201ENST00000603823 466 ntBASIC3.46□□□□□ -1.86
RAE1P78406 AC009233.1-201ENST00000616477 371 ntBASIC3.46□□□□□ -1.86
RAE1P78406 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.46□□□□□ -1.86
RAE1P78406 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RAE1P78406 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.46□□□□□ -1.86
RAE1P78406 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RAE1P78406 MFSD8-236ENST00000641509 4050 ntBASIC3.45□□□□□ -1.86
RAE1P78406 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RAE1P78406 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RAE1P78406 AC106871.1-201ENST00000568324 3102 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms