Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC021382.1-201ENST00000483523 359 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 RPL38P4-201ENST00000502376 214 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AC098591.2-201ENST00000510152 315 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AC006499.2-201ENST00000513470 337 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 RN7SKP31-201ENST00000516354 278 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.49□□□□□ -2.01
CCNA1P78396 OR6C7P-201ENST00000547875 934 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.49□□□□□ -2.01
CCNA1P78396 AC005951.2-201ENST00000576282 495 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 MIR5571-201ENST00000577998 113 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.49□□□□□ -2.01
CCNA1P78396 AC093673.2-201ENST00000609674 331 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.49□□□□□ -2.01
CCNA1P78396 SDR42E1P2-201ENST00000614861 481 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.49□□□□□ -2.01
CCNA1P78396 AC010378.1-201ENST00000619270 362 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.49□□□□□ -2.01
CCNA1P78396 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.49□□□□□ -2.01
CCNA1P78396 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.49□□□□□ -2.01
CCNA1P78396 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCNA1P78396 MTND4P35-201ENST00000604257 1375 ntBASIC2.49□□□□□ -2.01
CCNA1P78396 AC010889.1-201ENST00000566193 2666 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 U8.8-201ENST00000365399 135 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 SNORA6-201ENST00000384033 151 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AL023284.1-201ENST00000403956 276 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 RNU6-1140P-201ENST00000410517 106 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.48□□□□□ -2.01
CCNA1P78396 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.48□□□□□ -2.01
CCNA1P78396 HMGB1P18-201ENST00000438801 619 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 HMGN2P23-201ENST00000456759 269 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 RNU7-136P-201ENST00000458819 69 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC097493.1-201ENST00000463958 372 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC104563.1-201ENST00000476147 376 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC072039.1-201ENST00000477611 581 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCNA1P78396 AP003467.2-201ENST00000520175 319 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AP005902.1-201ENST00000521358 186 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.48□□□□□ -2.01
CCNA1P78396 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.48□□□□□ -2.01
CCNA1P78396 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.48□□□□□ -2.01
CCNA1P78396 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.48□□□□□ -2.01
CCNA1P78396 AC009977.1-201ENST00000586015 570 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AP000403.1-201ENST00000603349 851 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC009318.2-201ENST00000610917 651 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC023158.2-201ENST00000614876 543 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AL138955.1-201ENST00000622881 1040 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AP000720.1-201ENST00000625091 483 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 AC019226.1-201ENST00000625666 515 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.48□□□□□ -2.01
CCNA1P78396 MIR6073-201ENST00000352083 89 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.47□□□□□ -2.01
CCNA1P78396 AL590084.2-201ENST00000401481 382 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 AL161449.1-201ENST00000414531 1199 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.47□□□□□ -2.01
CCNA1P78396 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.47□□□□□ -2.01
CCNA1P78396 BPY2DP-201ENST00000422208 265 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.47□□□□□ -2.01
CCNA1P78396 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.47□□□□□ -2.01
CCNA1P78396 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.47□□□□□ -2.01
CCNA1P78396 RPL18AP17-201ENST00000455326 198 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.47□□□□□ -2.01
CCNA1P78396 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.47□□□□□ -2.01
CCNA1P78396 AC093752.1-206ENST00000511823 336 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 SCARNA3-201ENST00000517097 143 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 AC010186.2-204ENST00000537668 439 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.47□□□□□ -2.01
CCNA1P78396 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.47□□□□□ -2.01
CCNA1P78396 RNU6-1192P-201ENST00000612197 107 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.47□□□□□ -2.01
CCNA1P78396 AC011890.2-201ENST00000613393 294 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 RNU6-489P-201ENST00000618289 107 ntBASIC2.47□□□□□ -2.01
CCNA1P78396 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCNA1P78396 RNU6-1207P-201ENST00000384343 107 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 RPL23AP29-201ENST00000397284 453 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCNA1P78396 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.46□□□□□ -2.02
CCNA1P78396 MTND4P3-201ENST00000417829 541 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 SRIP2-201ENST00000428470 166 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.46□□□□□ -2.02
CCNA1P78396 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCNA1P78396 MTATP6P7-201ENST00000453315 681 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 BX322784.1-201ENST00000455793 1077 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AC013267.1-201ENST00000458227 267 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AC106872.3-201ENST00000495104 446 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AC117522.2-201ENST00000510049 657 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 RNA5SP458-201ENST00000516188 119 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 RNU6-295P-201ENST00000516901 104 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 RNA5SP290-201ENST00000517133 127 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.46□□□□□ -2.02
CCNA1P78396 MIR3199-1-201ENST00000582434 88 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AL139344.1-201ENST00000605228 195 ntBASIC2.46□□□□□ -2.02
CCNA1P78396 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.46□□□□□ -2.02
CCNA1P78396 AC007349.4-201ENST00000608114 532 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms