Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MTND5P1-201ENST00000445440 1375 ntBASIC4.12□□□□□ -1.75
GFRA1P56159 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GFRA1P56159 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
GFRA1P56159 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
GFRA1P56159 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 AL158163.1-201ENST00000603915 1649 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 Y_RNA.39-201ENST00000362620 98 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RNU1-83P-201ENST00000363426 164 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RNU6-1317P-201ENST00000364582 104 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RNU6-827P-201ENST00000365553 106 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RNU6-166P-201ENST00000384371 107 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 MIR325-201ENST00000385260 98 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.11□□□□□ -1.75
GFRA1P56159 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.11□□□□□ -1.75
GFRA1P56159 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.11□□□□□ -1.75
GFRA1P56159 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 AC098614.2-201ENST00000426040 255 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 RPL23AP93-201ENST00000440847 484 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AC092798.1-201ENST00000458542 409 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RPL21P104-201ENST00000464143 478 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RPL23AP45-201ENST00000476406 468 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RN7SL481P-201ENST00000477764 299 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AC069499.1-201ENST00000489433 509 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 RPL30P5-201ENST00000494923 336 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.11□□□□□ -1.75
GFRA1P56159 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.11□□□□□ -1.75
GFRA1P56159 OR8R1P-201ENST00000543943 764 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 CPDP1-201ENST00000579660 283 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.11□□□□□ -1.75
GFRA1P56159 AL161629.2-201ENST00000615347 275 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AP005019.3-201ENST00000620418 560 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 AC119674.1-207ENST00000641355 633 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.11□□□□□ -1.75
GFRA1P56159 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.11□□□□□ -1.75
GFRA1P56159 AC007390.2-201ENST00000606229 3803 ntBASIC4.11□□□□□ -1.75
GFRA1P56159 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GFRA1P56159 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.11□□□□□ -1.75
GFRA1P56159 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 Y_RNA.455-201ENST00000384230 98 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
GFRA1P56159 RNA5SP129-201ENST00000410276 118 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 AC016397.1-201ENST00000412463 242 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 RPL7AP25-201ENST00000423357 805 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 AL353997.1-201ENST00000432936 108 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.1□□□□□ -1.75
GFRA1P56159 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.1□□□□□ -1.75
GFRA1P56159 HMGB1P14-201ENST00000557424 591 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 HSPE1P5-201ENST00000561489 272 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 ZNF192P1-203ENST00000565888 810 ntBASIC4.1□□□□□ -1.75
GFRA1P56159 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
GFRA1P56159 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
GFRA1P56159 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GFRA1P56159 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.75
GFRA1P56159 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.09□□□□□ -1.75
GFRA1P56159 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 CPHL1P-201ENST00000461341 3407 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 Y_RNA.314-201ENST00000365114 102 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 U8.8-201ENST00000365399 135 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 RNU6-140P-201ENST00000384566 108 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 MIR548F4-201ENST00000408515 105 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 RNU2-23P-201ENST00000410545 195 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 RPL18P10-201ENST00000425606 538 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AC096644.2-201ENST00000429278 159 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AL512844.2-201ENST00000433990 593 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 NDUFB4P6-201ENST00000436819 366 ntBASIC4.09□□□□□ -1.75
GFRA1P56159 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.09□□□□□ -1.75
GFRA1P56159 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GFRA1P56159 AL591473.1-201ENST00000464297 313 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms