Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH13P55290 OR5J1P-201ENST00000313544 939 ntBASIC3.01□□□□□ -1.93
CDH13P55290 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH13P55290 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CDH13P55290 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH13P55290 RNU2-39P-201ENST00000410604 198 ntBASIC3.01□□□□□ -1.93
CDH13P55290 RPS12P24-201ENST00000412619 387 ntBASIC3.01□□□□□ -1.93
CDH13P55290 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH13P55290 GPM6BP2-201ENST00000432046 144 ntBASIC3.01□□□□□ -1.93
CDH13P55290 GPM6BP1-201ENST00000446387 144 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC079781.2-201ENST00000446424 169 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH13P55290 KLF3P2-201ENST00000465138 268 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC104472.2-201ENST00000469035 601 ntBASIC3.01□□□□□ -1.93
CDH13P55290 MTCO3P28-201ENST00000513351 515 ntBASIC3.01□□□□□ -1.93
CDH13P55290 SNORA31.21-201ENST00000517180 77 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH13P55290 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH13P55290 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH13P55290 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH13P55290 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH13P55290 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH13P55290 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.01□□□□□ -1.93
CDH13P55290 AC068135.2-201ENST00000569293 1028 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC012213.3-201ENST00000577199 777 ntBASIC3.01□□□□□ -1.93
CDH13P55290 MIR4429-201ENST00000580105 73 ntBASIC3.01□□□□□ -1.93
CDH13P55290 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH13P55290 AC068790.2-201ENST00000602601 557 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC008739.3-201ENST00000603262 127 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AL136363.1-201ENST00000605349 337 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC006566.1-201ENST00000608943 513 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC019176.2-201ENST00000611579 315 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC005332.10-201ENST00000612725 619 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AC004852.3-201ENST00000614131 326 ntBASIC3.01□□□□□ -1.93
CDH13P55290 AL161629.2-201ENST00000615347 275 ntBASIC3.01□□□□□ -1.93
CDH13P55290 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH13P55290 MTND5P7-201ENST00000413558 1798 ntBASIC3.01□□□□□ -1.93
CDH13P55290 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH13P55290 AL353743.1-202ENST00000431724 1695 ntBASIC3.01□□□□□ -1.93
CDH13P55290 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3□□□□□ -1.93
CDH13P55290 RNU6-188P-201ENST00000364207 107 ntBASIC3□□□□□ -1.93
CDH13P55290 RNU6-512P-201ENST00000364438 103 ntBASIC3□□□□□ -1.93
CDH13P55290 RNU6-108P-201ENST00000365558 107 ntBASIC3□□□□□ -1.93
CDH13P55290 SNORD67-201ENST00000390833 111 ntBASIC3□□□□□ -1.93
CDH13P55290 SNORA11-201ENST00000408789 128 ntBASIC3□□□□□ -1.93
CDH13P55290 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
CDH13P55290 RN7SKP58-201ENST00000411010 305 ntBASIC3□□□□□ -1.93
CDH13P55290 AC005300.1-201ENST00000428401 373 ntBASIC3□□□□□ -1.93
CDH13P55290 RPL31P35-201ENST00000431058 377 ntBASIC3□□□□□ -1.93
CDH13P55290 MTND4P25-201ENST00000441039 533 ntBASIC3□□□□□ -1.93
CDH13P55290 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3□□□□□ -1.93
CDH13P55290 RPL21P8-201ENST00000465083 535 ntBASIC3□□□□□ -1.93
CDH13P55290 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3□□□□□ -1.93
CDH13P55290 AC110794.1-201ENST00000505816 425 ntBASIC3□□□□□ -1.93
CDH13P55290 AC117522.1-201ENST00000509821 380 ntBASIC3□□□□□ -1.93
CDH13P55290 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3□□□□□ -1.93
CDH13P55290 RN7SKP298-201ENST00000515950 94 ntBASIC3□□□□□ -1.93
CDH13P55290 RNU6-430P-201ENST00000517078 107 ntBASIC3□□□□□ -1.93
CDH13P55290 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3□□□□□ -1.93
CDH13P55290 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3□□□□□ -1.93
CDH13P55290 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3□□□□□ -1.93
CDH13P55290 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3□□□□□ -1.93
CDH13P55290 UBL5P2-201ENST00000583788 219 ntBASIC3□□□□□ -1.93
CDH13P55290 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3□□□□□ -1.93
CDH13P55290 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3□□□□□ -1.93
CDH13P55290 NUTF2P8-201ENST00000604593 363 ntBASIC3□□□□□ -1.93
CDH13P55290 AC004805.2-201ENST00000605382 482 ntBASIC3□□□□□ -1.93
CDH13P55290 MIR98-201ENST00000606724 119 ntBASIC3□□□□□ -1.93
CDH13P55290 AC093783.1-201ENST00000612976 329 ntBASIC3□□□□□ -1.93
CDH13P55290 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH13P55290 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3□□□□□ -1.93
CDH13P55290 AC099842.1-201ENST00000619919 596 ntBASIC3□□□□□ -1.93
CDH13P55290 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CDH13P55290 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
CDH13P55290 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH13P55290 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH13P55290 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDH13P55290 Y_RNA.22-201ENST00000362492 102 ntBASIC2.99□□□□□ -1.93
CDH13P55290 RNU6-1097P-201ENST00000363586 107 ntBASIC2.99□□□□□ -1.93
CDH13P55290 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH13P55290 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH13P55290 RNU6-1119P-201ENST00000384349 108 ntBASIC2.99□□□□□ -1.93
CDH13P55290 MIR23B-201ENST00000384832 97 ntBASIC2.99□□□□□ -1.93
CDH13P55290 MIR670-201ENST00000390142 98 ntBASIC2.99□□□□□ -1.93
CDH13P55290 DEFB108C-201ENST00000400154 252 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH13P55290 BX295541.1-201ENST00000417774 250 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AL109913.1-201ENST00000421173 514 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC093106.2-201ENST00000428212 385 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC133104.1-201ENST00000429100 218 ntBASIC2.99□□□□□ -1.93
CDH13P55290 GPR143P-201ENST00000434155 205 ntBASIC2.99□□□□□ -1.93
CDH13P55290 DDX3P2-201ENST00000446138 111 ntBASIC2.99□□□□□ -1.93
CDH13P55290 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH13P55290 CECR9-201ENST00000453421 199 ntBASIC2.99□□□□□ -1.93
CDH13P55290 RN7SL863P-201ENST00000462370 296 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC091153.1-201ENST00000466297 402 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
CDH13P55290 MTND4LP22-201ENST00000508209 276 ntBASIC2.99□□□□□ -1.93
CDH13P55290 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH13P55290 RN7SKP43-201ENST00000516173 320 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms