Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 TXNP7-201ENST00000406296 293 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RNU2-2P-201ENST00000410396 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RNU6-1140P-201ENST00000410517 106 ntBASIC2.38□□□□□ -2.03
ACLYP53396 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
ACLYP53396 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ACLYP53396 NANOGP2-201ENST00000435391 727 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RPL35AP22-201ENST00000436855 335 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RPL7P54-201ENST00000438336 674 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AL445687.1-201ENST00000439946 251 ntBASIC2.38□□□□□ -2.03
ACLYP53396 OR10R1P-201ENST00000441524 1141 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.38□□□□□ -2.03
ACLYP53396 RPL12P25-201ENST00000455592 494 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RPL26P9-201ENST00000457466 433 ntBASIC2.38□□□□□ -2.03
ACLYP53396 EIF4EP3-201ENST00000498782 656 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AC079395.1-201ENST00000510981 262 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AC109445.1-201ENST00000512356 383 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AP003467.2-201ENST00000520175 319 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.38□□□□□ -2.03
ACLYP53396 OR11H5P-201ENST00000554039 926 ntBASIC2.38□□□□□ -2.03
ACLYP53396 MIR3117-201ENST00000584034 78 ntBASIC2.38□□□□□ -2.03
ACLYP53396 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.38□□□□□ -2.03
ACLYP53396 BNIP3P27-201ENST00000599991 412 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AP000942.3-201ENST00000603702 160 ntBASIC2.38□□□□□ -2.03
ACLYP53396 MTND4LP5-201ENST00000605152 292 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AC016727.1-205ENST00000605437 569 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AC090186.1-201ENST00000605991 572 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.15-201ENST00000611544 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.16-201ENST00000613119 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 MIR6845-201ENST00000613182 61 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.12-201ENST00000613778 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.20-201ENST00000613956 192 ntBASIC2.38□□□□□ -2.03
ACLYP53396 SDR42E1P2-201ENST00000614861 481 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.9-201ENST00000615427 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.11-201ENST00000616345 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.2-201ENST00000616535 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.3-201ENST00000617785 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.38□□□□□ -2.03
ACLYP53396 U2.19-201ENST00000618602 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 RNU2-1-201ENST00000618664 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.6-201ENST00000619225 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.5-201ENST00000619465 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 U2.10-201ENST00000620268 191 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AL356266.1-201ENST00000623311 483 ntBASIC2.38□□□□□ -2.03
ACLYP53396 AL138960.2-201ENST00000625145 535 ntBASIC2.38□□□□□ -2.03
ACLYP53396 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
ACLYP53396 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ACLYP53396 RNU5E-10P-201ENST00000363506 118 ntBASIC2.37□□□□□ -2.03
ACLYP53396 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
ACLYP53396 RNU6-432P-201ENST00000384196 109 ntBASIC2.37□□□□□ -2.03
ACLYP53396 RNA5SP213-201ENST00000391031 106 ntBASIC2.37□□□□□ -2.03
ACLYP53396 RNA5SP247-201ENST00000411181 105 ntBASIC2.37□□□□□ -2.03
ACLYP53396 HMGB1P49-201ENST00000418882 569 ntBASIC2.37□□□□□ -2.03
ACLYP53396 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.37□□□□□ -2.03
ACLYP53396 CYCSP49-201ENST00000420810 319 ntBASIC2.37□□□□□ -2.03
ACLYP53396 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.37□□□□□ -2.03
ACLYP53396 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.37□□□□□ -2.03
ACLYP53396 RPS15AP5-201ENST00000436276 388 ntBASIC2.37□□□□□ -2.03
ACLYP53396 MTCO1P53-201ENST00000441633 699 ntBASIC2.37□□□□□ -2.03
ACLYP53396 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.37□□□□□ -2.03
ACLYP53396 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.37□□□□□ -2.03
ACLYP53396 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.37□□□□□ -2.03
ACLYP53396 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.37□□□□□ -2.03
ACLYP53396 AC105252.1-201ENST00000503089 286 ntBASIC2.37□□□□□ -2.03
ACLYP53396 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.37□□□□□ -2.03
ACLYP53396 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.37□□□□□ -2.03
ACLYP53396 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
ACLYP53396 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.37□□□□□ -2.03
ACLYP53396 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.37□□□□□ -2.03
ACLYP53396 AC018645.2-201ENST00000609151 472 ntBASIC2.37□□□□□ -2.03
ACLYP53396 AC245297.2-201ENST00000610119 565 ntBASIC2.37□□□□□ -2.03
ACLYP53396 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.37□□□□□ -2.03
ACLYP53396 AC109809.1-201ENST00000619665 545 ntBASIC2.37□□□□□ -2.03
ACLYP53396 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.37□□□□□ -2.03
ACLYP53396 MIR7515-201ENST00000637837 67 ntBASIC2.37□□□□□ -2.03
ACLYP53396 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ACLYP53396 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.37□□□□□ -2.03
ACLYP53396 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
ACLYP53396 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
ACLYP53396 PABPC1P9-201ENST00000426076 1612 ntBASIC2.36□□□□□ -2.03
ACLYP53396 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ACLYP53396 RNU1-17P-201ENST00000363022 152 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RNU6-884P-201ENST00000363889 107 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RNU6-289P-201ENST00000364093 107 ntBASIC2.36□□□□□ -2.03
ACLYP53396 U8.8-201ENST00000365399 135 ntBASIC2.36□□□□□ -2.03
ACLYP53396 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
ACLYP53396 TAS2R15P-201ENST00000390674 928 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RNU2-49P-201ENST00000410666 184 ntBASIC2.36□□□□□ -2.03
ACLYP53396 MTCYBP38-201ENST00000417160 1123 ntBASIC2.36□□□□□ -2.03
ACLYP53396 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
ACLYP53396 UBE2V1P13-201ENST00000436983 439 ntBASIC2.36□□□□□ -2.03
ACLYP53396 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.36□□□□□ -2.03
ACLYP53396 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.36□□□□□ -2.03
ACLYP53396 AC135721.1-201ENST00000497954 479 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RPS27P27-201ENST00000498779 255 ntBASIC2.36□□□□□ -2.03
ACLYP53396 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.36□□□□□ -2.03
ACLYP53396 Y_RNA.673-201ENST00000516306 88 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RNA5SP471-201ENST00000516971 106 ntBASIC2.36□□□□□ -2.03
ACLYP53396 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
ACLYP53396 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms