Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC091133.4-201ENST00000511142 308 ntBASIC3.02□□□□□ -1.93
PDX1P52945 RNU1-61P-201ENST00000516107 151 ntBASIC3.02□□□□□ -1.93
PDX1P52945 RNU1-143P-201ENST00000516296 146 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AC090572.1-201ENST00000519251 160 ntBASIC3.02□□□□□ -1.93
PDX1P52945 HMGB1P41-201ENST00000520234 440 ntBASIC3.02□□□□□ -1.93
PDX1P52945 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDX1P52945 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.02□□□□□ -1.93
PDX1P52945 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDX1P52945 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.02□□□□□ -1.93
PDX1P52945 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.02□□□□□ -1.93
PDX1P52945 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.02□□□□□ -1.93
PDX1P52945 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.02□□□□□ -1.93
PDX1P52945 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.02□□□□□ -1.93
PDX1P52945 AC146944.4-201ENST00000602697 718 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AL136363.2-201ENST00000604173 851 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AL022154.1-201ENST00000604698 785 ntBASIC3.02□□□□□ -1.93
PDX1P52945 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.02□□□□□ -1.93
PDX1P52945 AL161734.1-201ENST00000609720 557 ntBASIC3.02□□□□□ -1.93
PDX1P52945 U1.23-201ENST00000610293 146 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AL390240.1-201ENST00000612950 384 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.02□□□□□ -1.93
PDX1P52945 RNU1-68P-201ENST00000615382 146 ntBASIC3.02□□□□□ -1.93
PDX1P52945 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.02□□□□□ -1.93
PDX1P52945 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AC072046.2-201ENST00000618366 268 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AC136475.10-201ENST00000620253 385 ntBASIC3.02□□□□□ -1.93
PDX1P52945 U1.39-201ENST00000621562 146 ntBASIC3.02□□□□□ -1.93
PDX1P52945 AC073476.4-201ENST00000628409 72 ntBASIC3.02□□□□□ -1.93
PDX1P52945 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.02□□□□□ -1.93
PDX1P52945 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDX1P52945 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDX1P52945 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.02□□□□□ -1.93
PDX1P52945 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PDX1P52945 AC091152.2-201ENST00000591628 2569 ntBASIC3.01□□□□□ -1.93
PDX1P52945 SNORA5B-201ENST00000363786 132 ntBASIC3.01□□□□□ -1.93
PDX1P52945 Y_RNA.517-201ENST00000384551 106 ntBASIC3.01□□□□□ -1.93
PDX1P52945 Y_RNA.582-201ENST00000391023 95 ntBASIC3.01□□□□□ -1.93
PDX1P52945 MIR1290-201ENST00000408735 78 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AL513331.1-201ENST00000411908 397 ntBASIC3.01□□□□□ -1.93
PDX1P52945 OR2AS1P-201ENST00000427827 319 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC133104.1-201ENST00000429100 218 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AL139132.1-201ENST00000431587 344 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.01□□□□□ -1.93
PDX1P52945 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.01□□□□□ -1.93
PDX1P52945 RNA5SP310-201ENST00000459084 116 ntBASIC3.01□□□□□ -1.93
PDX1P52945 RPS29P26-201ENST00000477483 171 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AL135752.1-201ENST00000479477 471 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.01□□□□□ -1.93
PDX1P52945 RPL37P25-201ENST00000507308 276 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.01□□□□□ -1.93
PDX1P52945 RN7SKP258-201ENST00000517151 304 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC009812.2-201ENST00000517657 457 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AP001804.3-201ENST00000525146 880 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AP006587.4-201ENST00000526053 529 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC011979.2-201ENST00000527568 352 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.01□□□□□ -1.93
PDX1P52945 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.01□□□□□ -1.93
PDX1P52945 AL391840.1-201ENST00000571144 367 ntBASIC3.01□□□□□ -1.93
PDX1P52945 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AP002360.4-201ENST00000606980 481 ntBASIC3.01□□□□□ -1.93
PDX1P52945 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PDX1P52945 AL589994.2-201ENST00000621124 579 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC099506.2-201ENST00000623074 221 ntBASIC3.01□□□□□ -1.93
PDX1P52945 AC091903.1-201ENST00000624322 454 ntBASIC3.01□□□□□ -1.93
PDX1P52945 MIR7153-201ENST00000637758 57 ntBASIC3.01□□□□□ -1.93
PDX1P52945 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.01□□□□□ -1.93
PDX1P52945 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.01□□□□□ -1.93
PDX1P52945 AC092447.7-201ENST00000422212 1621 ntBASIC3.01□□□□□ -1.93
PDX1P52945 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3□□□□□ -1.93
PDX1P52945 AF117829.1-206ENST00000621883 3802 ntBASIC3□□□□□ -1.93
PDX1P52945 MTND5P26-201ENST00000426018 1752 ntBASIC3□□□□□ -1.93
PDX1P52945 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3□□□□□ -1.93
PDX1P52945 RN7SKP226-201ENST00000364912 300 ntBASIC3□□□□□ -1.93
PDX1P52945 MIR325-201ENST00000385260 98 ntBASIC3□□□□□ -1.93
PDX1P52945 RNU6-1197P-201ENST00000391183 107 ntBASIC3□□□□□ -1.93
PDX1P52945 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
PDX1P52945 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3□□□□□ -1.93
PDX1P52945 AC137499.1-201ENST00000427602 88 ntBASIC3□□□□□ -1.93
PDX1P52945 MTCO2P11-201ENST00000431069 680 ntBASIC3□□□□□ -1.93
PDX1P52945 AC092573.2-201ENST00000434546 243 ntBASIC3□□□□□ -1.93
PDX1P52945 HMGB3P12-201ENST00000438745 556 ntBASIC3□□□□□ -1.93
PDX1P52945 RPS15AP9-201ENST00000439856 381 ntBASIC3□□□□□ -1.93
PDX1P52945 DNAJC19P4-201ENST00000440115 345 ntBASIC3□□□□□ -1.93
PDX1P52945 CBWD4P-201ENST00000445695 655 ntBASIC3□□□□□ -1.93
PDX1P52945 AL136380.1-201ENST00000447970 162 ntBASIC3□□□□□ -1.93
PDX1P52945 SSXP4-201ENST00000451349 245 ntBASIC3□□□□□ -1.93
PDX1P52945 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3□□□□□ -1.93
PDX1P52945 RPS27P29-201ENST00000463110 252 ntBASIC3□□□□□ -1.93
PDX1P52945 RPL7P5-201ENST00000471472 736 ntBASIC3□□□□□ -1.93
PDX1P52945 KCTD9P5-201ENST00000504141 1170 ntBASIC3□□□□□ -1.93
PDX1P52945 RNU7-51P-201ENST00000516560 62 ntBASIC3□□□□□ -1.93
PDX1P52945 RNU6-1092P-201ENST00000516955 87 ntBASIC3□□□□□ -1.93
PDX1P52945 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3□□□□□ -1.93
PDX1P52945 AC022690.1-201ENST00000526681 550 ntBASIC3□□□□□ -1.93
PDX1P52945 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3□□□□□ -1.93
PDX1P52945 AC087883.1-201ENST00000551882 391 ntBASIC3□□□□□ -1.93
PDX1P52945 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3□□□□□ -1.93
PDX1P52945 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3□□□□□ -1.93
PDX1P52945 AC007363.1-201ENST00000604736 620 ntBASIC3□□□□□ -1.93
PDX1P52945 AL121992.2-201ENST00000606262 256 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms