Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC093012.1-202ENST00000549403 582 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 SYF2P1-201ENST00000550658 413 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL355836.1-201ENST00000555951 870 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL133241.1-201ENST00000556832 487 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 LARP7P3-201ENST00000579888 337 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL033523.1-201ENST00000605153 153 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.39□□□□□ -1.87
CLCN3P51790 AC010133.1-201ENST00000615809 842 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AC073534.2-201ENST00000620377 381 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL359880.1-201ENST00000621879 266 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 FRG1KP-201ENST00000623592 341 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 AL137790.1-201ENST00000634283 177 ntBASIC3.39□□□□□ -1.87
CLCN3P51790 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CLCN3P51790 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCN3P51790 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLCN3P51790 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLCN3P51790 OR5J1P-201ENST00000313544 939 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RNU5E-1-201ENST00000362477 120 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLCN3P51790 U3.26-201ENST00000391236 204 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 GSTA9P-201ENST00000406231 611 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 PIGFP2-201ENST00000421400 651 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 MTND4LP11-201ENST00000422184 280 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CLCN3P51790 USP9YP36-201ENST00000424581 829 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCN3P51790 AC025750.2-201ENST00000442609 450 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCN3P51790 AL121769.1-201ENST00000469473 401 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RPS3AP17-201ENST00000472594 777 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AC096576.1-201ENST00000489014 359 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 HMGB3P15-201ENST00000507326 574 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 ARL4AP2-201ENST00000507378 601 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RNU1-143P-201ENST00000516296 146 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RN7SKP272-201ENST00000516988 232 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RNA5SP337-201ENST00000517007 109 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.38□□□□□ -1.87
CLCN3P51790 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.38□□□□□ -1.87
CLCN3P51790 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCN3P51790 AP001804.3-201ENST00000525146 880 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.38□□□□□ -1.87
CLCN3P51790 AC106900.2-201ENST00000604994 317 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AC103710.2-201ENST00000609912 942 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 U1.23-201ENST00000610293 146 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AC004696.1-201ENST00000614345 607 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 RNU1-68P-201ENST00000615382 146 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 U1.39-201ENST00000621562 146 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 AL136313.1-201ENST00000624804 202 ntBASIC3.38□□□□□ -1.87
CLCN3P51790 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.38□□□□□ -1.87
CLCN3P51790 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLCN3P51790 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
CLCN3P51790 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCN3P51790 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLCN3P51790 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.37□□□□□ -1.87
CLCN3P51790 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLCN3P51790 RPL7P26-201ENST00000333817 754 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 HSPE1P11-201ENST00000339579 310 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 Y_RNA.88-201ENST00000363029 99 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 RNY4P34-201ENST00000364779 95 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 SNORD6-201ENST00000365444 73 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 CALM2P3-201ENST00000400429 449 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AP000567.1-201ENST00000406413 156 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 RPS15AP12-201ENST00000419498 388 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AL590383.1-201ENST00000428602 75 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCN3P51790 MTND1P2-201ENST00000430604 821 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCN3P51790 MTND4P18-201ENST00000447010 465 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.37□□□□□ -1.87
CLCN3P51790 AC006539.3-201ENST00000454258 129 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AL049714.1-201ENST00000466686 347 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CLCN3P51790 AC010631.1-201ENST00000474150 156 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 RBM43P1-201ENST00000476891 1081 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.37□□□□□ -1.87
CLCN3P51790 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCN3P51790 Vault.3-201ENST00000516676 95 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AP003072.2-201ENST00000527756 676 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC128657.1-201ENST00000549459 145 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.37□□□□□ -1.87
CLCN3P51790 H3F3AP1-201ENST00000559984 334 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AL391840.1-201ENST00000571144 367 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.37□□□□□ -1.87
CLCN3P51790 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.37□□□□□ -1.87
CLCN3P51790 AC245014.2-201ENST00000603689 287 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC246785.4-201ENST00000605374 287 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.37□□□□□ -1.87
CLCN3P51790 AC068880.5-201ENST00000624331 290 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 AC073476.4-201ENST00000628409 72 ntBASIC3.37□□□□□ -1.87
CLCN3P51790 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms