Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HTTP42858 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.64□□□□□ -2.31
HTTP42858 RNA5SP63-201ENST00000391225 112 ntBASIC0.63□□□□□ -2.31
HTTP42858 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.63□□□□□ -2.31
HTTP42858 AC239798.3-201ENST00000454459 408 ntBASIC0.63□□□□□ -2.31
HTTP42858 AC008269.2-201ENST00000561915 1105 ntBASIC0.63□□□□□ -2.31
HTTP42858 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.63□□□□□ -2.31
HTTP42858 AL591034.1-201ENST00000407447 340 ntBASIC0.63□□□□□ -2.31
HTTP42858 AC092628.1-201ENST00000436250 252 ntBASIC0.63□□□□□ -2.31
HTTP42858 RPL17P49-201ENST00000443728 411 ntBASIC0.63□□□□□ -2.31
HTTP42858 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.63□□□□□ -2.31
HTTP42858 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.63□□□□□ -2.31
HTTP42858 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.63□□□□□ -2.31
HTTP42858 RNU4-77P-201ENST00000516692 156 ntBASIC0.63□□□□□ -2.31
HTTP42858 AP001486.3-201ENST00000615334 372 ntBASIC0.63□□□□□ -2.31
HTTP42858 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.63□□□□□ -2.31
HTTP42858 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
HTTP42858 Y_RNA.132-201ENST00000363421 102 ntBASIC0.62□□□□□ -2.31
HTTP42858 RNY3-201ENST00000365484 102 ntBASIC0.62□□□□□ -2.31
HTTP42858 SNORA46.1-201ENST00000391069 153 ntBASIC0.62□□□□□ -2.31
HTTP42858 TRBVB-201ENST00000477100 408 ntBASIC0.62□□□□□ -2.31
HTTP42858 RPL21P136-201ENST00000605378 396 ntBASIC0.62□□□□□ -2.31
HTTP42858 RLIMP2-201ENST00000427891 1563 ntBASIC0.62□□□□□ -2.31
HTTP42858 RNU6-1305P-201ENST00000364353 104 ntBASIC0.62□□□□□ -2.31
HTTP42858 MTCO1P3-201ENST00000429327 192 ntBASIC0.62□□□□□ -2.31
HTTP42858 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.62□□□□□ -2.31
HTTP42858 KLF3P2-201ENST00000465138 268 ntBASIC0.62□□□□□ -2.31
HTTP42858 AP003355.1-201ENST00000518956 587 ntBASIC0.62□□□□□ -2.31
HTTP42858 AC106052.1-201ENST00000608029 497 ntBASIC0.62□□□□□ -2.31
HTTP42858 AC007792.1-201ENST00000623023 402 ntBASIC0.62□□□□□ -2.31
HTTP42858 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HTTP42858 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
HTTP42858 MIR1468-201ENST00000410600 86 ntBASIC0.62□□□□□ -2.31
HTTP42858 RN7SKP61-201ENST00000410642 295 ntBASIC0.62□□□□□ -2.31
HTTP42858 SDAD1P3-201ENST00000427380 333 ntBASIC0.62□□□□□ -2.31
HTTP42858 RPS27P26-201ENST00000494583 239 ntBASIC0.62□□□□□ -2.31
HTTP42858 AC109927.2-201ENST00000506416 303 ntBASIC0.62□□□□□ -2.31
HTTP42858 AL163153.1-201ENST00000554223 283 ntBASIC0.62□□□□□ -2.31
HTTP42858 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
HTTP42858 SNORA63.3-201ENST00000362682 132 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU4-72P-201ENST00000410754 173 ntBASIC0.61□□□□□ -2.31
HTTP42858 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.61□□□□□ -2.31
HTTP42858 AC005741.1-201ENST00000511094 432 ntBASIC0.61□□□□□ -2.31
HTTP42858 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.61□□□□□ -2.31
HTTP42858 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.61□□□□□ -2.31
HTTP42858 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.61□□□□□ -2.31
HTTP42858 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.61□□□□□ -2.31
HTTP42858 AC245884.12-201ENST00000615364 59 ntBASIC0.61□□□□□ -2.31
HTTP42858 AL162373.1-201ENST00000620433 407 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU6-1320P-201ENST00000390838 107 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU6-1269P-201ENST00000391139 107 ntBASIC0.61□□□□□ -2.31
HTTP42858 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HTTP42858 FO393413.1-201ENST00000402892 195 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.61□□□□□ -2.31
HTTP42858 AL356379.1-201ENST00000414105 126 ntBASIC0.61□□□□□ -2.31
HTTP42858 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.61□□□□□ -2.31
HTTP42858 AL356867.1-201ENST00000429623 299 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU6-599P-201ENST00000459383 107 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU6-1193P-201ENST00000459461 107 ntBASIC0.61□□□□□ -2.31
HTTP42858 HMGN2P9-201ENST00000476875 229 ntBASIC0.61□□□□□ -2.31
HTTP42858 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.61□□□□□ -2.31
HTTP42858 AC022662.1-201ENST00000580252 331 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU6-368P-201ENST00000620928 107 ntBASIC0.61□□□□□ -2.31
HTTP42858 RNU6-538P-201ENST00000622329 107 ntBASIC0.61□□□□□ -2.31
HTTP42858 AL442644.1-201ENST00000454390 3105 ntBASIC0.61□□□□□ -2.31
HTTP42858 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.6□□□□□ -2.31
HTTP42858 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.6□□□□□ -2.31
HTTP42858 SNORD108-201ENST00000459332 71 ntBASIC0.6□□□□□ -2.31
HTTP42858 MTND4P34-201ENST00000572715 1371 ntBASIC0.6□□□□□ -2.31
HTTP42858 RNU6-799P-201ENST00000363567 107 ntBASIC0.6□□□□□ -2.31
HTTP42858 RNU6-1263P-201ENST00000384601 106 ntBASIC0.6□□□□□ -2.31
HTTP42858 AL158823.1-201ENST00000418441 478 ntBASIC0.6□□□□□ -2.31
HTTP42858 RFESDP1-201ENST00000422350 461 ntBASIC0.6□□□□□ -2.31
HTTP42858 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.6□□□□□ -2.31
HTTP42858 SNRPGP12-201ENST00000449481 213 ntBASIC0.6□□□□□ -2.31
HTTP42858 RPL37P6-202ENST00000464216 403 ntBASIC0.6□□□□□ -2.31
HTTP42858 AC103851.1-201ENST00000506833 274 ntBASIC0.6□□□□□ -2.31
HTTP42858 NDUFS5P6-201ENST00000529136 295 ntBASIC0.6□□□□□ -2.31
HTTP42858 AC008749.1-201ENST00000597650 306 ntBASIC0.6□□□□□ -2.31
HTTP42858 AC240442.1-201ENST00000616055 283 ntBASIC0.6□□□□□ -2.31
HTTP42858 AC009318.3-201ENST00000616916 503 ntBASIC0.6□□□□□ -2.31
HTTP42858 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HTTP42858 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
HTTP42858 PRELID3BP11-201ENST00000414230 479 ntBASIC0.6□□□□□ -2.31
HTTP42858 RPL7P31-201ENST00000450192 724 ntBASIC0.6□□□□□ -2.31
HTTP42858 PMCHL2-203ENST00000457791 237 ntBASIC0.6□□□□□ -2.31
HTTP42858 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.6□□□□□ -2.31
HTTP42858 RNU6-970P-201ENST00000516312 107 ntBASIC0.6□□□□□ -2.31
HTTP42858 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HTTP42858 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.6□□□□□ -2.31
HTTP42858 SNRPGP15-201ENST00000600149 222 ntBASIC0.6□□□□□ -2.31
HTTP42858 Y_RNA.18-201ENST00000362461 102 ntBASIC0.59□□□□□ -2.31
HTTP42858 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.59□□□□□ -2.31
HTTP42858 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.59□□□□□ -2.31
HTTP42858 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.59□□□□□ -2.31
HTTP42858 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
HTTP42858 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.59□□□□□ -2.31
HTTP42858 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.59□□□□□ -2.31
HTTP42858 AL157700.1-201ENST00000561973 1432 ntBASIC0.59□□□□□ -2.31
HTTP42858 MTCO1P23-201ENST00000415223 1526 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms