Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HMGB1P9-201ENST00000429856 646 ntBASIC2.12□□□□□ -2.07
RFC3P40938 MED14P1-201ENST00000430517 648 ntBASIC2.12□□□□□ -2.07
RFC3P40938 RPS15AP28-201ENST00000435088 386 ntBASIC2.12□□□□□ -2.07
RFC3P40938 ELOCP7-201ENST00000439968 331 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AC098831.1-201ENST00000440661 216 ntBASIC2.12□□□□□ -2.07
RFC3P40938 TPT1P14-201ENST00000448018 505 ntBASIC2.12□□□□□ -2.07
RFC3P40938 PAXBP1P1-201ENST00000449315 447 ntBASIC2.12□□□□□ -2.07
RFC3P40938 MRPL42P6-201ENST00000486397 371 ntBASIC2.12□□□□□ -2.07
RFC3P40938 RPS27AP10-201ENST00000496103 208 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.12□□□□□ -2.07
RFC3P40938 RNU6-927P-201ENST00000516199 100 ntBASIC2.12□□□□□ -2.07
RFC3P40938 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.12□□□□□ -2.07
RFC3P40938 MTCYBP20-201ENST00000524239 1129 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.12□□□□□ -2.07
RFC3P40938 AC009712.1-201ENST00000564938 316 ntBASIC2.12□□□□□ -2.07
RFC3P40938 BNIP3P27-201ENST00000599991 412 ntBASIC2.12□□□□□ -2.07
RFC3P40938 BNIP3P31-201ENST00000604515 566 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AC006270.3-201ENST00000605967 1036 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AC007349.4-201ENST00000608114 532 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AC092574.1-201ENST00000609771 420 ntBASIC2.12□□□□□ -2.07
RFC3P40938 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AL589743.7-201ENST00000612637 233 ntBASIC2.12□□□□□ -2.07
RFC3P40938 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AC116618.1-201ENST00000634617 774 ntBASIC2.12□□□□□ -2.07
RFC3P40938 U2.21-201ENST00000637295 81 ntBASIC2.12□□□□□ -2.07
RFC3P40938 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
RFC3P40938 AC080128.1-201ENST00000474389 1917 ntBASIC2.12□□□□□ -2.07
RFC3P40938 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RFC3P40938 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFC3P40938 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 MTND5P6-201ENST00000422338 1798 ntBASIC2.11□□□□□ -2.07
RFC3P40938 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 AC010889.1-201ENST00000566193 2666 ntBASIC2.11□□□□□ -2.07
RFC3P40938 RNU6-777P-201ENST00000364265 104 ntBASIC2.11□□□□□ -2.07
RFC3P40938 Y_RNA.245-201ENST00000364493 95 ntBASIC2.11□□□□□ -2.07
RFC3P40938 USP9YP33-201ENST00000412220 421 ntBASIC2.11□□□□□ -2.07
RFC3P40938 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 USP12PX-201ENST00000432383 1057 ntBASIC2.11□□□□□ -2.07
RFC3P40938 ATP5F1P1-201ENST00000433775 569 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AL121890.1-201ENST00000435457 205 ntBASIC2.11□□□□□ -2.07
RFC3P40938 USP9YP35-201ENST00000435696 412 ntBASIC2.11□□□□□ -2.07
RFC3P40938 MTCO1P53-201ENST00000441633 699 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.11□□□□□ -2.07
RFC3P40938 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.11□□□□□ -2.07
RFC3P40938 AC008481.1-201ENST00000463278 396 ntBASIC2.11□□□□□ -2.07
RFC3P40938 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.11□□□□□ -2.07
RFC3P40938 AC021146.8-201ENST00000507455 733 ntBASIC2.11□□□□□ -2.07
RFC3P40938 MTND5P13-201ENST00000513046 1079 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.11□□□□□ -2.07
RFC3P40938 OR5BN1P-201ENST00000532955 829 ntBASIC2.11□□□□□ -2.07
RFC3P40938 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.11□□□□□ -2.07
RFC3P40938 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.11□□□□□ -2.07
RFC3P40938 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
RFC3P40938 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.11□□□□□ -2.07
RFC3P40938 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.11□□□□□ -2.07
RFC3P40938 AC009063.1-201ENST00000563342 702 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AC135628.1-201ENST00000568867 534 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AC060771.1-201ENST00000582031 164 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AC104984.5-201ENST00000586878 94 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 AC004805.2-201ENST00000605382 482 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.11□□□□□ -2.07
RFC3P40938 AC107075.1-201ENST00000613695 314 ntBASIC2.11□□□□□ -2.07
RFC3P40938 MIR203B-201ENST00000636080 86 ntBASIC2.11□□□□□ -2.07
RFC3P40938 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
RFC3P40938 AC110491.1-201ENST00000562191 2010 ntBASIC2.11□□□□□ -2.07
RFC3P40938 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFC3P40938 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFC3P40938 MTND4P27-201ENST00000450813 1354 ntBASIC2.1□□□□□ -2.07
RFC3P40938 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFC3P40938 AC004520.1-201ENST00000608362 1413 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
RFC3P40938 RPL21P132-201ENST00000331267 462 ntBASIC2.1□□□□□ -2.07
RFC3P40938 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFC3P40938 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFC3P40938 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
RFC3P40938 RNU6-778P-201ENST00000363269 103 ntBASIC2.1□□□□□ -2.07
RFC3P40938 RNU6-220P-201ENST00000390919 107 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AL136310.1-201ENST00000404926 654 ntBASIC2.1□□□□□ -2.07
RFC3P40938 RPL17P12-201ENST00000413391 526 ntBASIC2.1□□□□□ -2.07
RFC3P40938 MTATP6P20-201ENST00000414147 562 ntBASIC2.1□□□□□ -2.07
RFC3P40938 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.1□□□□□ -2.07
RFC3P40938 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
RFC3P40938 SKA2P1-201ENST00000425592 390 ntBASIC2.1□□□□□ -2.07
RFC3P40938 MICF-203ENST00000432679 129 ntBASIC2.1□□□□□ -2.07
RFC3P40938 MTND1P28-201ENST00000435623 950 ntBASIC2.1□□□□□ -2.07
RFC3P40938 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
RFC3P40938 AC020550.1-201ENST00000447385 163 ntBASIC2.1□□□□□ -2.07
RFC3P40938 MTCO1P27-201ENST00000448269 226 ntBASIC2.1□□□□□ -2.07
RFC3P40938 RPL21P134-201ENST00000453468 483 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AC108729.1-201ENST00000487812 947 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.1□□□□□ -2.07
RFC3P40938 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.1□□□□□ -2.07
RFC3P40938 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.1□□□□□ -2.07
RFC3P40938 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.1□□□□□ -2.07
RFC3P40938 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.1□□□□□ -2.07
RFC3P40938 NACAP3-201ENST00000552100 481 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms