Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
SNCAP37840 AP000926.3-201ENST00000497201 299 ntBASIC0.96□□□□□ -2.26
SNCAP37840 HMGB1P35-201ENST00000503360 598 ntBASIC0.96□□□□□ -2.26
SNCAP37840 RNA5SP445-201ENST00000515889 115 ntBASIC0.96□□□□□ -2.26
SNCAP37840 SNORA31.6-201ENST00000516241 130 ntBASIC0.96□□□□□ -2.26
SNCAP37840 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.96□□□□□ -2.26
SNCAP37840 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.96□□□□□ -2.26
SNCAP37840 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SNCAP37840 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.96□□□□□ -2.26
SNCAP37840 MIR4421-201ENST00000578133 69 ntBASIC0.96□□□□□ -2.26
SNCAP37840 MIR4303-201ENST00000581299 66 ntBASIC0.96□□□□□ -2.26
SNCAP37840 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.96□□□□□ -2.26
SNCAP37840 Z99571.1-201ENST00000636677 394 ntBASIC0.96□□□□□ -2.26
SNCAP37840 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SNCAP37840 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SNCAP37840 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.95□□□□□ -2.26
SNCAP37840 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SNCAP37840 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SNCAP37840 MIR518A2-201ENST00000384966 87 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AC010385.1-201ENST00000412374 256 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AC096649.2-201ENST00000416186 393 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AL591704.2-201ENST00000421658 181 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AC092648.1-201ENST00000425870 423 ntBASIC0.95□□□□□ -2.26
SNCAP37840 RPL30P4-201ENST00000429309 333 ntBASIC0.95□□□□□ -2.26
SNCAP37840 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.95□□□□□ -2.26
SNCAP37840 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.95□□□□□ -2.26
SNCAP37840 RPS20P22-201ENST00000473700 357 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AC004223.1-201ENST00000479840 271 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AC091917.2-201ENST00000505002 744 ntBASIC0.95□□□□□ -2.26
SNCAP37840 YWHAEP4-201ENST00000505390 198 ntBASIC0.95□□□□□ -2.26
SNCAP37840 OR4P1P-201ENST00000530808 1136 ntBASIC0.95□□□□□ -2.26
SNCAP37840 AC073413.2-201ENST00000604332 360 ntBASIC0.95□□□□□ -2.26
SNCAP37840 RNU1-17P-201ENST00000363022 152 ntBASIC0.94□□□□□ -2.26
SNCAP37840 SNORA62.1-201ENST00000364287 154 ntBASIC0.94□□□□□ -2.26
SNCAP37840 SNORD14B-201ENST00000364533 90 ntBASIC0.94□□□□□ -2.26
SNCAP37840 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SNCAP37840 RNU6-441P-201ENST00000384545 106 ntBASIC0.94□□□□□ -2.26
SNCAP37840 MIR1261-201ENST00000408659 82 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.94□□□□□ -2.26
SNCAP37840 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 RPL23AP76-201ENST00000441860 458 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.94□□□□□ -2.26
SNCAP37840 MRPS17P3-201ENST00000465453 385 ntBASIC0.94□□□□□ -2.26
SNCAP37840 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.94□□□□□ -2.26
SNCAP37840 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 SNORA44.1-201ENST00000517031 108 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 C1DP5-201ENST00000525775 383 ntBASIC0.94□□□□□ -2.26
SNCAP37840 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.94□□□□□ -2.26
SNCAP37840 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 MIR3660-201ENST00000584845 100 ntBASIC0.94□□□□□ -2.26
SNCAP37840 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.94□□□□□ -2.26
SNCAP37840 AC098826.3-201ENST00000603823 466 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC013553.2-201ENST00000604244 589 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC018638.7-201ENST00000605836 1114 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC110792.4-201ENST00000609843 298 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC008498.1-201ENST00000613012 531 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AL445493.3-201ENST00000619568 477 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.94□□□□□ -2.26
SNCAP37840 AC092192.1-201ENST00000633154 1018 ntBASIC0.94□□□□□ -2.26
SNCAP37840 AC097655.1-201ENST00000635075 318 ntBASIC0.94□□□□□ -2.26
SNCAP37840 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SNCAP37840 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SNCAP37840 CBX3P1-201ENST00000325243 554 ntBASIC0.93□□□□□ -2.26
SNCAP37840 SNORA7.1-201ENST00000363750 139 ntBASIC0.93□□□□□ -2.26
SNCAP37840 RNU4-51P-201ENST00000364206 140 ntBASIC0.93□□□□□ -2.26
SNCAP37840 SNORA40.19-201ENST00000390846 128 ntBASIC0.93□□□□□ -2.26
SNCAP37840 TXNP7-201ENST00000406296 293 ntBASIC0.93□□□□□ -2.26
SNCAP37840 RNU6-516P-201ENST00000411381 104 ntBASIC0.93□□□□□ -2.26
SNCAP37840 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.93□□□□□ -2.26
SNCAP37840 LUZP4P1-201ENST00000415420 344 ntBASIC0.93□□□□□ -2.26
SNCAP37840 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.93□□□□□ -2.26
SNCAP37840 NDUFB4P7-201ENST00000423198 363 ntBASIC0.93□□□□□ -2.26
SNCAP37840 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
SNCAP37840 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.93□□□□□ -2.26
SNCAP37840 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.93□□□□□ -2.26
SNCAP37840 RPS15AP5-201ENST00000436276 388 ntBASIC0.93□□□□□ -2.26
SNCAP37840 PTENP1-201ENST00000447117 1215 ntBASIC0.93□□□□□ -2.26
SNCAP37840 RPL36AP21-201ENST00000490372 323 ntBASIC0.93□□□□□ -2.26
SNCAP37840 AC139453.3-201ENST00000493276 369 ntBASIC0.93□□□□□ -2.26
SNCAP37840 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.93□□□□□ -2.26
SNCAP37840 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.93□□□□□ -2.26
SNCAP37840 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.93□□□□□ -2.26
SNCAP37840 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.93□□□□□ -2.26
SNCAP37840 DUXAP1-201ENST00000556632 463 ntBASIC0.93□□□□□ -2.26
SNCAP37840 AL031274.2-201ENST00000599419 203 ntBASIC0.93□□□□□ -2.26
SNCAP37840 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.93□□□□□ -2.26
SNCAP37840 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.93□□□□□ -2.26
SNCAP37840 AC018926.3-201ENST00000618841 406 ntBASIC0.93□□□□□ -2.26
SNCAP37840 AC024581.2-201ENST00000619986 252 ntBASIC0.93□□□□□ -2.26
SNCAP37840 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.93□□□□□ -2.26
SNCAP37840 RNU6-457P-201ENST00000363999 107 ntBASIC0.92□□□□□ -2.26
SNCAP37840 MIR513A1-201ENST00000385138 129 ntBASIC0.92□□□□□ -2.26
SNCAP37840 MIR325-201ENST00000385260 98 ntBASIC0.92□□□□□ -2.26
SNCAP37840 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SNCAP37840 AC012497.1-201ENST00000429392 575 ntBASIC0.92□□□□□ -2.26
SNCAP37840 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.92□□□□□ -2.26
SNCAP37840 AL121890.1-201ENST00000435457 205 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms