Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 SNORA51.4-201ENST00000364993 124 ntBASIC2.8□□□□□ -1.96
SHC1P29353 Y_RNA.381-201ENST00000365666 102 ntBASIC2.8□□□□□ -1.96
SHC1P29353 SNORA54-201ENST00000384281 123 ntBASIC2.8□□□□□ -1.96
SHC1P29353 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SHC1P29353 AC068050.1-201ENST00000394891 380 ntBASIC2.8□□□□□ -1.96
SHC1P29353 RNU2-8P-201ENST00000410727 190 ntBASIC2.8□□□□□ -1.96
SHC1P29353 RN7SKP58-201ENST00000411010 305 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.8□□□□□ -1.96
SHC1P29353 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 RPL23AP83-201ENST00000434984 473 ntBASIC2.8□□□□□ -1.96
SHC1P29353 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.8□□□□□ -1.96
SHC1P29353 RPS15AP9-201ENST00000439856 381 ntBASIC2.8□□□□□ -1.96
SHC1P29353 RPS12P18-201ENST00000442381 270 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC016696.1-201ENST00000446949 318 ntBASIC2.8□□□□□ -1.96
SHC1P29353 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 AC091179.1-201ENST00000461606 579 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC023194.1-201ENST00000493084 308 ntBASIC2.8□□□□□ -1.96
SHC1P29353 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 AC004062.1-201ENST00000509926 645 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 AC017037.2-201ENST00000513850 890 ntBASIC2.8□□□□□ -1.96
SHC1P29353 RNU1-61P-201ENST00000516107 151 ntBASIC2.8□□□□□ -1.96
SHC1P29353 Y_RNA.693-201ENST00000516641 110 ntBASIC2.8□□□□□ -1.96
SHC1P29353 SNORA70.24-201ENST00000517233 118 ntBASIC2.8□□□□□ -1.96
SHC1P29353 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.8□□□□□ -1.96
SHC1P29353 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.8□□□□□ -1.96
SHC1P29353 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 SETP2-201ENST00000553886 926 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.8□□□□□ -1.96
SHC1P29353 AL512360.1-201ENST00000555346 234 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC025678.1-201ENST00000567861 338 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 AC006504.3-201ENST00000586818 523 ntBASIC2.8□□□□□ -1.96
SHC1P29353 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.8□□□□□ -1.96
SHC1P29353 XIAPP1-201ENST00000603162 600 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC008277.2-201ENST00000605196 797 ntBASIC2.8□□□□□ -1.96
SHC1P29353 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 AC006338.1-201ENST00000618453 749 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC139792.3-201ENST00000623525 224 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AL159972.1-201ENST00000625150 448 ntBASIC2.8□□□□□ -1.96
SHC1P29353 MIR1321-201ENST00000637766 79 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC099654.14-201ENST00000638599 341 ntBASIC2.8□□□□□ -1.96
SHC1P29353 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
SHC1P29353 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SHC1P29353 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 Y_RNA.89-201ENST00000363031 102 ntBASIC2.79□□□□□ -1.96
SHC1P29353 RNU6-1085P-201ENST00000363576 107 ntBASIC2.79□□□□□ -1.96
SHC1P29353 SNORA20.2-201ENST00000383922 131 ntBASIC2.79□□□□□ -1.96
SHC1P29353 SNORA9-201ENST00000384215 133 ntBASIC2.79□□□□□ -1.96
SHC1P29353 SNORD51-201ENST00000384320 80 ntBASIC2.79□□□□□ -1.96
SHC1P29353 MIR19A-201ENST00000384878 82 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC110754.1-201ENST00000399740 601 ntBASIC2.79□□□□□ -1.96
SHC1P29353 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC092447.6-201ENST00000414578 210 ntBASIC2.79□□□□□ -1.96
SHC1P29353 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 RPS15AP12-201ENST00000419498 388 ntBASIC2.79□□□□□ -1.96
SHC1P29353 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.79□□□□□ -1.96
SHC1P29353 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 TIMM9P1-201ENST00000436122 256 ntBASIC2.79□□□□□ -1.96
SHC1P29353 UBE2V1P13-201ENST00000436983 439 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 RAC1P7-201ENST00000445367 377 ntBASIC2.79□□□□□ -1.96
SHC1P29353 RPL23AP20-201ENST00000447965 421 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AL136380.1-201ENST00000447970 162 ntBASIC2.79□□□□□ -1.96
SHC1P29353 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 DPPA3P1-201ENST00000448050 469 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.79□□□□□ -1.96
SHC1P29353 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.79□□□□□ -1.96
SHC1P29353 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.79□□□□□ -1.96
SHC1P29353 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 RN7SKP43-201ENST00000516173 320 ntBASIC2.79□□□□□ -1.96
SHC1P29353 RNA5SP337-201ENST00000517007 109 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 AC090572.1-201ENST00000519251 160 ntBASIC2.79□□□□□ -1.96
SHC1P29353 MTND1P35-201ENST00000526739 508 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 AC118273.2-201ENST00000532092 465 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms