Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AL592045.1-201ENST00000429867 352 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 MTND4LP16-201ENST00000440828 295 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 MRPL50P4-201ENST00000446432 475 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.6□□□□□ -1.83
EPHA3P29320 TRBV1-201ENST00000476502 284 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 Y_RNA.654-201ENST00000497848 106 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 FAM206BP-201ENST00000510179 541 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.6□□□□□ -1.83
EPHA3P29320 RNU6-914P-201ENST00000516749 109 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.6□□□□□ -1.83
EPHA3P29320 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.6□□□□□ -1.83
EPHA3P29320 AC008011.1-201ENST00000545989 227 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.6□□□□□ -1.83
EPHA3P29320 RPS3AP23-202ENST00000574601 686 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 MIR4742-201ENST00000581069 85 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 BNIP3P25-201ENST00000596023 559 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AC244505.7-201ENST00000599675 272 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.6□□□□□ -1.83
EPHA3P29320 AC092747.3-201ENST00000603769 301 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.6□□□□□ -1.83
EPHA3P29320 AC013553.2-201ENST00000604244 589 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AL592436.1-201ENST00000605135 558 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AC021646.1-201ENST00000605469 484 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 MIR6867-201ENST00000610636 67 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 AC023043.4-201ENST00000612081 449 ntBASIC3.6□□□□□ -1.83
EPHA3P29320 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.6□□□□□ -1.83
EPHA3P29320 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
EPHA3P29320 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EPHA3P29320 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
EPHA3P29320 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
EPHA3P29320 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
EPHA3P29320 Y_RNA.100-201ENST00000363141 102 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 RNU6-1167P-201ENST00000363227 94 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 Y_RNA.166-201ENST00000363730 102 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 SNORA16.2-201ENST00000390991 127 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AL122016.1-201ENST00000403365 367 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 POLHP1-201ENST00000411806 470 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 MTND3P8-201ENST00000412909 339 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC080125.1-201ENST00000414888 684 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AL356095.1-201ENST00000417217 199 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 NDUFB4P7-201ENST00000423198 363 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 AC007919.1-201ENST00000429380 217 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 AL365400.1-201ENST00000431854 640 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.59□□□□□ -1.83
EPHA3P29320 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.59□□□□□ -1.83
EPHA3P29320 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHA3P29320 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 AC087588.1-201ENST00000462203 316 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 AC009901.1-201ENST00000506703 541 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC103851.1-201ENST00000506833 274 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 APOOP4-201ENST00000513530 597 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.59□□□□□ -1.83
EPHA3P29320 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.59□□□□□ -1.83
EPHA3P29320 OR11H5P-201ENST00000554039 926 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC026464.5-201ENST00000562497 722 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 MIR3690-201ENST00000580266 75 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AC098826.3-201ENST00000603823 466 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 AL359697.1-201ENST00000624879 587 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 OR52H1-202ENST00000641796 1061 ntBASIC3.59□□□□□ -1.83
EPHA3P29320 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHA3P29320 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.59□□□□□ -1.83
EPHA3P29320 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
EPHA3P29320 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.59□□□□□ -1.84
EPHA3P29320 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
EPHA3P29320 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
EPHA3P29320 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
EPHA3P29320 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
EPHA3P29320 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
EPHA3P29320 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
EPHA3P29320 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
EPHA3P29320 RNU4-73P-201ENST00000363164 141 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 RN7SKP227-201ENST00000364445 330 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 RNU6-393P-201ENST00000384475 107 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 MT-TD-201ENST00000387419 68 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
EPHA3P29320 RNA5SP219-201ENST00000390940 113 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 RPL21P65-201ENST00000406094 466 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 RN7SKP32-201ENST00000410167 303 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 BX682237.1-201ENST00000415016 335 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 Z85995.1-201ENST00000415547 335 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.58□□□□□ -1.84
EPHA3P29320 AC006989.1-201ENST00000427212 131 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 AL669831.1-202ENST00000428504 417 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 AL356867.1-201ENST00000429623 299 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.58□□□□□ -1.84
EPHA3P29320 HSPD1P21-201ENST00000436541 245 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 GTF2IP13-201ENST00000438487 386 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.58□□□□□ -1.84
EPHA3P29320 AMD1P1-201ENST00000457220 922 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 RNU6-329P-201ENST00000459618 107 ntBASIC3.58□□□□□ -1.84
EPHA3P29320 AC010618.1-201ENST00000469924 477 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms