Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RPL7P37-201ENST00000425095 738 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 AC098614.2-201ENST00000426040 255 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 ZNF863P-201ENST00000426746 417 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN4P29074 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.74□□□□□ -1.97
PTPN4P29074 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.74□□□□□ -1.97
PTPN4P29074 RPL7P36-201ENST00000444633 681 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 DDX3P2-201ENST00000446138 111 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RPL23AP20-201ENST00000447965 421 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN4P29074 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN4P29074 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN4P29074 AC027673.1-201ENST00000456245 405 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 BZW1P2-201ENST00000473537 826 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RPL30P6-201ENST00000475925 342 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RPS15AP34-201ENST00000487776 387 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 AL160314.1-201ENST00000490836 438 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN4P29074 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.74□□□□□ -1.97
PTPN4P29074 AC113155.1-201ENST00000511141 769 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.74□□□□□ -1.97
PTPN4P29074 RN7SKP132-201ENST00000516001 208 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RNU6-759P-201ENST00000516740 103 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 RN7SKP40-201ENST00000517211 242 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 AP000907.2-201ENST00000530827 353 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.74□□□□□ -1.97
PTPN4P29074 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.74□□□□□ -1.97
PTPN4P29074 MRPS36P5-201ENST00000551909 298 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.74□□□□□ -1.97
PTPN4P29074 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.74□□□□□ -1.97
PTPN4P29074 AC060766.3-201ENST00000591442 263 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 ATP1B3P1-201ENST00000605365 821 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.74□□□□□ -1.97
PTPN4P29074 BX664608.1-201ENST00000610519 487 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 AL356266.1-201ENST00000623311 483 ntBASIC2.74□□□□□ -1.97
PTPN4P29074 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTPN4P29074 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTPN4P29074 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTPN4P29074 Y_RNA.97-201ENST00000363094 102 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 Y_RNA.169-201ENST00000363745 96 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 RNU5A-8P-201ENST00000364102 114 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PTPN4P29074 SNORA18.3-201ENST00000384122 132 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 RNU6-217P-201ENST00000384164 104 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 MIR19A-201ENST00000384878 82 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC009414.1-201ENST00000427200 443 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC092427.1-202ENST00000430569 476 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 MTATP6P17-201ENST00000431030 672 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 LARP1BP3-201ENST00000437229 869 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN4P29074 MTND1P26-201ENST00000440488 538 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC009296.1-201ENST00000443146 155 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 KC877373.1-201ENST00000479066 408 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC138853.1-201ENST00000503549 823 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.73□□□□□ -1.97
PTPN4P29074 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN4P29074 AC118465.1-201ENST00000513820 1271 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 RNU6-927P-201ENST00000516199 100 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 RNU6-390P-201ENST00000516259 103 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.73□□□□□ -1.97
PTPN4P29074 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PTPN4P29074 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.73□□□□□ -1.97
PTPN4P29074 AC135628.1-201ENST00000568867 534 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 MIR4319-201ENST00000577285 85 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 MIR4307-201ENST00000582802 84 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 NRBF2P5-201ENST00000603087 788 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC024153.1-201ENST00000603103 365 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AP000403.1-201ENST00000603349 851 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 MTCYBP22-201ENST00000603788 447 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 AC090970.3-201ENST00000612566 866 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.73□□□□□ -1.97
PTPN4P29074 AL603755.1-201ENST00000619504 163 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 MTND1P37-201ENST00000636562 264 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.73□□□□□ -1.97
PTPN4P29074 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PTPN4P29074 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTPN4P29074 CCT4P2-201ENST00000233836 1548 ntBASIC2.73□□□□□ -1.97
PTPN4P29074 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
PTPN4P29074 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.72□□□□□ -1.97
PTPN4P29074 MAPK10-266ENST00000641066 6555 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 MIR6073-201ENST00000352083 89 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 MIR26A1-201ENST00000362205 77 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 RNU6-1284P-201ENST00000363701 100 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.72□□□□□ -1.97
PTPN4P29074 AC006366.1-201ENST00000422002 759 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 RPS27AP14-201ENST00000422868 454 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.72□□□□□ -1.97
PTPN4P29074 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
PTPN4P29074 AL445567.1-201ENST00000439121 144 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.72□□□□□ -1.97
PTPN4P29074 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.72□□□□□ -1.97
PTPN4P29074 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.72□□□□□ -1.97
PTPN4P29074 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms