Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNORA62.1-201ENST00000364287 154 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 RNU1-73P-201ENST00000383971 164 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 EI24P2-201ENST00000397776 1076 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.26□□□□□ -1.89
ABCD3P28288 RNU4-55P-201ENST00000410731 137 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 RPS29P4-201ENST00000414733 161 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 RPS15AP6-201ENST00000420703 385 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ABCD3P28288 AC073063.1-201ENST00000434352 607 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AL451074.3-201ENST00000437709 472 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.26□□□□□ -1.89
ABCD3P28288 RPL21P23-201ENST00000446654 460 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC126182.1-201ENST00000478134 357 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC098591.2-201ENST00000510152 315 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 RNU2-27P-201ENST00000516185 142 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.26□□□□□ -1.89
ABCD3P28288 SUB1P1-201ENST00000524415 382 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 FAM92A1P1-201ENST00000528023 890 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC103843.2-201ENST00000530523 682 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AP003034.1-201ENST00000534621 422 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.26□□□□□ -1.89
ABCD3P28288 AL157871.3-201ENST00000557231 293 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 MIR1273C-201ENST00000578669 77 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.26□□□□□ -1.89
ABCD3P28288 AC008521.1-201ENST00000587471 187 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 BNIP3P22-201ENST00000593399 556 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 AC012468.1-201ENST00000604888 430 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 U4.6-201ENST00000621618 127 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.26□□□□□ -1.89
ABCD3P28288 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
ABCD3P28288 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.26□□□□□ -1.89
ABCD3P28288 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.26□□□□□ -1.89
ABCD3P28288 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.26□□□□□ -1.89
ABCD3P28288 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ABCD3P28288 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ABCD3P28288 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
ABCD3P28288 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCD3P28288 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCD3P28288 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCD3P28288 Y_RNA.159-201ENST00000363674 87 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 SNORD115-7-201ENST00000365306 82 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 RNU6-395P-201ENST00000365662 106 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ABCD3P28288 CD24P4-201ENST00000382840 243 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MIR449B-201ENST00000384995 97 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 AL158156.1-201ENST00000422509 473 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 RPL31P12-201ENST00000422587 358 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MTCYBP5-201ENST00000423752 1135 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AL365496.1-201ENST00000426885 215 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MTCO2P19-201ENST00000427513 598 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 DPPA2P1-201ENST00000428060 556 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 HMGN2P31-201ENST00000432430 273 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCD3P28288 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.25□□□□□ -1.89
ABCD3P28288 BRK1P2-201ENST00000442875 223 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MTND1P1-201ENST00000445453 368 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AC008264.1-201ENST00000447612 367 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 NANOGNBP1-201ENST00000448444 480 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCD3P28288 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCD3P28288 AC091153.1-201ENST00000466297 402 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AC128713.1-201ENST00000471495 306 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 RPL36AP51-201ENST00000487216 318 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 SUMO2P6-201ENST00000505273 288 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 RPL37P25-201ENST00000507308 276 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCD3P28288 RNU1-103P-201ENST00000516502 125 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 RNA5SP503-201ENST00000517047 117 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.25□□□□□ -1.89
ABCD3P28288 OR5B10P-201ENST00000532869 642 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AC245505.1-201ENST00000556398 224 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MIR4429-201ENST00000580105 73 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 MIR4775-201ENST00000581168 75 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 AC025449.1-201ENST00000603896 529 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 U3.45-201ENST00000607547 219 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 AL359740.1-201ENST00000624340 592 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
ABCD3P28288 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCD3P28288 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCD3P28288 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
ABCD3P28288 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ABCD3P28288 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ABCD3P28288 ZNF680P1-201ENST00000436625 1469 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms