Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL8A1P27658 MIR137-201ENST00000385223 102 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
COL8A1P27658 RNA5SP213-201ENST00000391031 106 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 RNU1-139P-201ENST00000391307 165 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 CTSL3P-202ENST00000412179 788 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 AL138785.1-201ENST00000425821 331 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 RNU7-197P-201ENST00000458836 62 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 RNU7-107P-201ENST00000459121 61 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 SUMO2P6-201ENST00000505273 288 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.63□□□□□ -1.67
COL8A1P27658 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.63□□□□□ -1.67
COL8A1P27658 RN7SKP49-201ENST00000516675 260 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.63□□□□□ -1.67
COL8A1P27658 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.63□□□□□ -1.67
COL8A1P27658 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.63□□□□□ -1.67
COL8A1P27658 AC023043.3-201ENST00000593113 385 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 AL645944.1-201ENST00000603857 493 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 AC010266.2-201ENST00000564741 3255 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL8A1P27658 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 ZNF204P-201ENST00000416749 2397 ntBASIC4.63□□□□□ -1.67
COL8A1P27658 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.63□□□□□ -1.67
COL8A1P27658 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL8A1P27658 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.63□□□□□ -1.67
COL8A1P27658 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL8A1P27658 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL8A1P27658 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL8A1P27658 AC092593.1-201ENST00000515413 1815 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.62□□□□□ -1.67
COL8A1P27658 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.62□□□□□ -1.67
COL8A1P27658 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 RNA5SP453-201ENST00000362503 119 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
COL8A1P27658 MIR92A2-201ENST00000385299 75 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 U3.22-201ENST00000391120 215 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 RNU2-21P-201ENST00000410368 188 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 ELOCP19-201ENST00000411919 318 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AC007161.1-204ENST00000423039 460 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AP000936.3-201ENST00000438127 255 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.62□□□□□ -1.67
COL8A1P27658 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.62□□□□□ -1.67
COL8A1P27658 AC090602.1-201ENST00000469695 252 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AC140172.1-201ENST00000502928 141 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 RNU6-1114P-201ENST00000516022 107 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AC008694.2-201ENST00000517591 306 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.62□□□□□ -1.67
COL8A1P27658 MIR4277-201ENST00000578298 84 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 MIR1273C-201ENST00000578669 77 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.62□□□□□ -1.67
COL8A1P27658 AC010928.2-201ENST00000588017 287 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 AC068831.7-201ENST00000616954 363 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 SCARNA4-201ENST00000629045 128 ntBASIC4.62□□□□□ -1.67
COL8A1P27658 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL8A1P27658 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
COL8A1P27658 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL8A1P27658 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.61□□□□□ -1.67
COL8A1P27658 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
COL8A1P27658 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.61□□□□□ -1.67
COL8A1P27658 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL8A1P27658 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL8A1P27658 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
COL8A1P27658 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL8A1P27658 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL8A1P27658 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.61□□□□□ -1.67
COL8A1P27658 RNA5SP191-201ENST00000362585 102 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 RNA5SP361-201ENST00000362686 118 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 OR1L6-202ENST00000373684 1044 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 AC063976.4-201ENST00000421971 163 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.61□□□□□ -1.67
COL8A1P27658 AC009296.1-201ENST00000443146 155 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 RPS20P10-201ENST00000451209 253 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 RNU6-191P-201ENST00000516295 94 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 RNU6-1315P-201ENST00000517187 99 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.61□□□□□ -1.67
COL8A1P27658 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.61□□□□□ -1.67
COL8A1P27658 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.61□□□□□ -1.67
COL8A1P27658 MTND5P34-201ENST00000568888 325 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 AL139395.1-201ENST00000603662 160 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 RMST_6.1-201ENST00000611980 203 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 AL591926.8-201ENST00000616876 211 ntBASIC4.61□□□□□ -1.67
COL8A1P27658 RNA5SP439-201ENST00000617595 124 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms