Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MED14P1-201ENST00000430517 648 ntBASIC2.07□□□□□ -2.08
USF1P22415 HMGB3P12-201ENST00000438745 556 ntBASIC2.07□□□□□ -2.08
USF1P22415 ELOCP7-201ENST00000439968 331 ntBASIC2.07□□□□□ -2.08
USF1P22415 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 AC020550.1-201ENST00000447385 163 ntBASIC2.07□□□□□ -2.08
USF1P22415 AP000542.1-201ENST00000448473 371 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USF1P22415 CACYBPP2-201ENST00000453625 678 ntBASIC2.07□□□□□ -2.08
USF1P22415 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USF1P22415 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.07□□□□□ -2.08
USF1P22415 snoU109.3-201ENST00000459477 145 ntBASIC2.07□□□□□ -2.08
USF1P22415 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.07□□□□□ -2.08
USF1P22415 RPS29P21-201ENST00000496272 170 ntBASIC2.07□□□□□ -2.08
USF1P22415 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.07□□□□□ -2.08
USF1P22415 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.07□□□□□ -2.08
USF1P22415 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.07□□□□□ -2.08
USF1P22415 AC234781.5-201ENST00000508429 271 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC098591.2-201ENST00000510152 315 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
USF1P22415 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.07□□□□□ -2.08
USF1P22415 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.07□□□□□ -2.08
USF1P22415 NACAP3-201ENST00000552100 481 ntBASIC2.07□□□□□ -2.08
USF1P22415 MTCYBP23-201ENST00000558717 1102 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC023813.2-201ENST00000564321 469 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.07□□□□□ -2.08
USF1P22415 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.07□□□□□ -2.08
USF1P22415 MTND3P19-201ENST00000603825 345 ntBASIC2.07□□□□□ -2.08
USF1P22415 AC004805.2-201ENST00000605382 482 ntBASIC2.07□□□□□ -2.08
USF1P22415 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.07□□□□□ -2.08
USF1P22415 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USF1P22415 AC110491.1-201ENST00000562191 2010 ntBASIC2.07□□□□□ -2.08
USF1P22415 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
USF1P22415 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USF1P22415 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.06□□□□□ -2.08
USF1P22415 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
USF1P22415 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.06□□□□□ -2.08
USF1P22415 MTND5P29-201ENST00000458676 1807 ntBASIC2.06□□□□□ -2.08
USF1P22415 RNU1-73P-201ENST00000383971 164 ntBASIC2.06□□□□□ -2.08
USF1P22415 RN7SKP266-201ENST00000410232 287 ntBASIC2.06□□□□□ -2.08
USF1P22415 RPL21P24-201ENST00000413752 448 ntBASIC2.06□□□□□ -2.08
USF1P22415 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.06□□□□□ -2.08
USF1P22415 SEPT2P1-201ENST00000419651 180 ntBASIC2.06□□□□□ -2.08
USF1P22415 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.06□□□□□ -2.08
USF1P22415 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 NANOGP5-201ENST00000424456 877 ntBASIC2.06□□□□□ -2.08
USF1P22415 HMGB1P9-201ENST00000429856 646 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC098831.1-201ENST00000440661 216 ntBASIC2.06□□□□□ -2.08
USF1P22415 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.06□□□□□ -2.08
USF1P22415 COX6CP12-201ENST00000446748 202 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 snoU13.15-201ENST00000459407 104 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC090096.1-201ENST00000489168 390 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC010587.2-201ENST00000511727 448 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 EEF1A1P37-201ENST00000522748 715 ntBASIC2.06□□□□□ -2.08
USF1P22415 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.06□□□□□ -2.08
USF1P22415 AC023824.2-201ENST00000566185 400 ntBASIC2.06□□□□□ -2.08
USF1P22415 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.06□□□□□ -2.08
USF1P22415 MIR4648-201ENST00000580107 72 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.06□□□□□ -2.08
USF1P22415 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.06□□□□□ -2.08
USF1P22415 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
USF1P22415 AP000403.1-201ENST00000603349 851 ntBASIC2.06□□□□□ -2.08
USF1P22415 AL158050.2-201ENST00000605336 568 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC007349.4-201ENST00000608114 532 ntBASIC2.06□□□□□ -2.08
USF1P22415 AC004908.2-201ENST00000609090 574 ntBASIC2.06□□□□□ -2.08
USF1P22415 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
USF1P22415 AP006437.1-201ENST00000641440 3685 ntBASIC2.05□□□□□ -2.08
USF1P22415 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
USF1P22415 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USF1P22415 RNU4-68P-201ENST00000364314 141 ntBASIC2.05□□□□□ -2.08
USF1P22415 SNORD114-30-201ENST00000364448 72 ntBASIC2.05□□□□□ -2.08
USF1P22415 MTATP6P19-201ENST00000413797 659 ntBASIC2.05□□□□□ -2.08
USF1P22415 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 MORF4L1P6-201ENST00000418771 268 ntBASIC2.05□□□□□ -2.08
USF1P22415 BTF3L4P3-201ENST00000418879 476 ntBASIC2.05□□□□□ -2.08
USF1P22415 DPH3P2-201ENST00000422618 250 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 AL139415.2-201ENST00000431968 163 ntBASIC2.05□□□□□ -2.08
USF1P22415 MTND1P28-201ENST00000435623 950 ntBASIC2.05□□□□□ -2.08
USF1P22415 AL031313.1-201ENST00000448435 256 ntBASIC2.05□□□□□ -2.08
USF1P22415 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.05□□□□□ -2.08
USF1P22415 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.05□□□□□ -2.08
USF1P22415 AC010631.1-201ENST00000474150 156 ntBASIC2.05□□□□□ -2.08
USF1P22415 RPS27AP10-201ENST00000496103 208 ntBASIC2.05□□□□□ -2.08
USF1P22415 RPS27P27-201ENST00000498779 255 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC093809.1-201ENST00000509155 340 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.05□□□□□ -2.08
USF1P22415 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.05□□□□□ -2.08
USF1P22415 AC021269.2-201ENST00000532318 330 ntBASIC2.05□□□□□ -2.08
USF1P22415 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USF1P22415 AC093012.1-202ENST00000549403 582 ntBASIC2.05□□□□□ -2.08
USF1P22415 AL133153.1-201ENST00000557756 303 ntBASIC2.05□□□□□ -2.08
USF1P22415 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms