Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC022968.1-201ENST00000567372 442 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 MIR4697-201ENST00000582977 78 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC073539.2-201ENST00000597113 165 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.23□□□□□ -1.73
COL6A2P12110 AC007938.3-201ENST00000604965 623 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 AC064801.1-201ENST00000612025 407 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 PISRT1.1-201ENST00000616930 107 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 MIR7703-201ENST00000620784 77 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 PLCE1P1-201ENST00000622094 305 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL6A2P12110 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.23□□□□□ -1.73
COL6A2P12110 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.23□□□□□ -1.73
COL6A2P12110 AC010733.2-201ENST00000589496 5702 ntBASIC4.23□□□□□ -1.73
COL6A2P12110 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL6A2P12110 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL6A2P12110 RNU5A-1-201ENST00000362698 116 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 Y_RNA.133-201ENST00000363428 110 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 RNU6-335P-201ENST00000364563 113 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 Y_RNA.459-201ENST00000384251 102 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 MIR192-201ENST00000384915 110 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 SNORA11-201ENST00000408789 128 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 CYP4F29P-201ENST00000420685 446 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 UBE2V1P4-201ENST00000425374 344 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.22□□□□□ -1.73
COL6A2P12110 MTND5P22-201ENST00000458380 195 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 RN7SL481P-201ENST00000477764 299 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AC108860.1-201ENST00000484521 383 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 RPS15AP34-201ENST00000487776 387 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.22□□□□□ -1.73
COL6A2P12110 AC146944.2-203ENST00000502493 354 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 AC139495.1-202ENST00000513164 354 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 RN7SKP295-201ENST00000517264 153 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AC069113.1-201ENST00000517763 267 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AC009902.1-201ENST00000519351 183 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.22□□□□□ -1.73
COL6A2P12110 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.22□□□□□ -1.73
COL6A2P12110 LRRC37A5P-203ENST00000580181 585 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 MIR3671-201ENST00000580455 88 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.22□□□□□ -1.73
COL6A2P12110 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.22□□□□□ -1.73
COL6A2P12110 AC002044.1-201ENST00000606707 158 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 MIR378J-201ENST00000611988 109 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 MIR6780A-201ENST00000615089 68 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 AL078596.1-201ENST00000624856 447 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL6A2P12110 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
COL6A2P12110 ZNF285B-201ENST00000561698 1767 ntBASIC4.22□□□□□ -1.73
COL6A2P12110 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL6A2P12110 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
COL6A2P12110 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.21□□□□□ -1.73
COL6A2P12110 RAD17P1-201ENST00000418130 2042 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL6A2P12110 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A2P12110 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL6A2P12110 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
COL6A2P12110 Y_RNA.144-201ENST00000363521 113 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 Y_RNA.252-201ENST00000364556 101 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 RNA5SP505-201ENST00000364748 108 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
COL6A2P12110 SNORA75.6-201ENST00000391318 127 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 RNU6-607P-201ENST00000411283 108 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.21□□□□□ -1.74
COL6A2P12110 TMSB10P2-201ENST00000416049 131 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.21□□□□□ -1.74
COL6A2P12110 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.21□□□□□ -1.74
COL6A2P12110 HSFY6P-201ENST00000445573 403 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.21□□□□□ -1.74
COL6A2P12110 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.21□□□□□ -1.74
COL6A2P12110 AC084198.1-201ENST00000477747 402 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AC092451.1-201ENST00000480211 153 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AC025554.1-201ENST00000505641 188 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 MLLT10P2-201ENST00000506434 249 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
COL6A2P12110 AC092436.3-201ENST00000511788 257 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.21□□□□□ -1.74
COL6A2P12110 Y_RNA.670-201ENST00000516255 105 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 RAB9BP1-201ENST00000519581 626 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.21□□□□□ -1.74
COL6A2P12110 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.21□□□□□ -1.74
COL6A2P12110 MIR548AC-201ENST00000585049 88 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 SNRPGP15-201ENST00000600149 222 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AL354984.3-201ENST00000604803 325 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AC009229.3-201ENST00000608056 282 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 AL360181.4-201ENST00000621752 134 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL6A2P12110 AL049641.1-201ENST00000441055 1948 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 MTND5P30-201ENST00000452896 1731 ntBASIC4.21□□□□□ -1.74
COL6A2P12110 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A2P12110 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms