Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXC6P09630 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC6P09630 AL138799.3-201ENST00000438968 350 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AL135938.1-201ENST00000443141 297 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 UBE2V1P7-201ENST00000446395 340 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AMD1P1-201ENST00000457220 922 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 KC877373.1-201ENST00000479066 408 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 HMGN1P12-201ENST00000499125 195 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 MTCYBP18-201ENST00000501056 747 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 SCARNA24.1-201ENST00000516465 137 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 RN7SKP60-201ENST00000516985 239 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC6P09630 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC6P09630 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC6P09630 OR8L1P-201ENST00000534005 955 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC6P09630 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC6P09630 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC6P09630 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC6P09630 AL162413.1-201ENST00000603198 110 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 C8orf59P2-201ENST00000603441 271 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AL353621.2-201ENST00000605340 133 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AC008945.2-201ENST00000606056 604 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC6P09630 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC6P09630 RMST_8.1-201ENST00000610287 165 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AC006065.5-201ENST00000623427 349 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AC040168.1-201ENST00000623594 991 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 AC009161.2-201ENST00000624626 138 ntBASIC3.52□□□□□ -1.85
HOXC6P09630 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC6P09630 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HOXC6P09630 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC6P09630 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC6P09630 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC6P09630 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
HOXC6P09630 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC6P09630 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC6P09630 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HOXC6P09630 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC6P09630 AL672296.1-201ENST00000427780 2158 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC6P09630 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC6P09630 SNORD56.2-201ENST00000363242 71 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RNU6-1322P-201ENST00000364309 107 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RNU6-359P-201ENST00000365466 108 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HOXC6P09630 RNU6-1158P-201ENST00000391167 107 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RNU2-47P-201ENST00000410649 186 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RPL21P111-201ENST00000418453 477 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 TIMM9P1-201ENST00000436122 256 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 UBE2V1P13-201ENST00000436983 439 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC6P09630 RAC1P7-201ENST00000445367 377 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC6P09630 CEACAMP4-201ENST00000457676 421 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 AC010401.1-201ENST00000463867 348 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RPS4XP13-201ENST00000483219 789 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RPL36AP51-201ENST00000487216 318 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC6P09630 TMEM248P1-201ENST00000510579 951 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 RNA5SP401-201ENST00000515920 127 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC6P09630 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.51□□□□□ -1.85
HOXC6P09630 MIR3124-201ENST00000582636 67 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 FGF7P1-201ENST00000582820 288 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC6P09630 RMST_3.1-201ENST00000611651 109 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 YWHAEP7-203ENST00000622054 312 ntBASIC3.51□□□□□ -1.85
HOXC6P09630 FER-210ENST00000628534 558 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC6P09630 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC6P09630 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC6P09630 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HOXC6P09630 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HOXC6P09630 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC6P09630 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC6P09630 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC6P09630 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC6P09630 CBX3P1-201ENST00000325243 554 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 MIR22-201ENST00000362190 85 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 Y_RNA.86-201ENST00000363020 111 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNY1P12-201ENST00000364251 105 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNY3P13-201ENST00000365542 102 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC6P09630 SNORA69-201ENST00000383895 132 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 Y_RNA.481-201ENST00000384373 102 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 MIR184-201ENST00000384962 84 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNU6-328P-201ENST00000390887 106 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RN7SKP285-201ENST00000410137 318 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RN7SKP284-201ENST00000411002 343 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 RNA5SP31-201ENST00000411144 127 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 OR9R1P-201ENST00000412200 877 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC6P09630 RPL31P2-201ENST00000413849 377 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 OR51A5P-201ENST00000415429 942 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 MTCO3P12-201ENST00000416718 547 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 MRPL50P2-201ENST00000416821 482 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC6P09630 PSMA2P3-201ENST00000429685 675 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 BX679664.1-201ENST00000434429 253 ntBASIC3.5□□□□□ -1.85
HOXC6P09630 AC098614.3-201ENST00000438957 440 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms