Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC136618.2-201ENST00000575091 400 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 DEFB131E-202ENST00000602581 683 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AL139286.2-201ENST00000606838 396 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC104073.3-201ENST00000610942 955 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC005332.10-201ENST00000612725 619 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC025594.3-201ENST00000613068 790 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 AC243773.3-201ENST00000613270 256 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC006927.3-201ENST00000638789 384 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC009812.4-201ENST00000569134 1805 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HOXC4P09017 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC4P09017 AC008568.2-201ENST00000623862 2313 ntBASIC2.51□□□□□ -2.01
HOXC4P09017 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC4P09017 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC4P09017 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HOXC4P09017 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HOXC4P09017 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HOXC4P09017 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 SNORA25.6-201ENST00000364121 118 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXC4P09017 SNORA75-201ENST00000384158 137 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 DHFRP6-201ENST00000401776 268 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC4P09017 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC4P09017 MTND1P28-201ENST00000435623 950 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXC4P09017 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC4P09017 ST13P20-201ENST00000447996 1065 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 TPT1P7-201ENST00000458300 517 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 MEMO1P3-201ENST00000459811 302 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 RPS29P12-201ENST00000460178 152 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AC116337.2-201ENST00000477662 156 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 HSPE1P6-201ENST00000479457 291 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 TMEM251P1-201ENST00000503717 318 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC4P09017 AL359273.1-201ENST00000510918 627 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 RNA5SP320-201ENST00000516263 124 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC4P09017 AP001646.1-201ENST00000527936 915 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC4P09017 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC4P09017 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC4P09017 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.5□□□□□ -2.01
HOXC4P09017 MTND1P15-201ENST00000579262 949 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC4P09017 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HOXC4P09017 AC012065.4-201ENST00000602445 679 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 NUTF2P8-201ENST00000604593 363 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 HSPE1P7-201ENST00000604681 321 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AL021997.1-201ENST00000605757 193 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AC103710.4-201ENST00000609301 899 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AL357080.1-201ENST00000617394 239 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AC068792.1-201ENST00000621354 417 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC4P09017 IGHVIII-44-202ENST00000636235 289 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AC010149.2-201ENST00000637608 315 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC4P09017 AL079343.1-201ENST00000572358 1771 ntBASIC2.5□□□□□ -2.01
HOXC4P09017 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 Y_RNA.41-201ENST00000362646 102 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RNU5F-6P-201ENST00000362979 116 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 Y_RNA.97-201ENST00000363094 102 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RNU6-1119P-201ENST00000384349 108 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RNY3P10-201ENST00000384764 102 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 MIR518C-201ENST00000384822 101 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RNU6-192P-201ENST00000391253 100 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RNU2-43P-201ENST00000410306 190 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RNU2-47P-201ENST00000410649 186 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 Y_RNA.619-201ENST00000410951 90 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC4P09017 CDK8P2-201ENST00000415020 547 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AL139413.1-201ENST00000421309 217 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXC4P09017 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC4P09017 AC024082.2-201ENST00000434771 238 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 UBE2FP3-201ENST00000436366 524 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC4P09017 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.49□□□□□ -2.01
HOXC4P09017 RPL7P36-201ENST00000444633 681 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC4P09017 USP9YP10-201ENST00000454868 628 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 AC097493.1-201ENST00000463958 372 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RPS15AP17-201ENST00000470598 390 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 RN7SL297P-201ENST00000483161 293 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC4P09017 SEM1P1-201ENST00000506694 209 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC4P09017 AC109329.2-201ENST00000519658 482 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC4P09017 AP000873.5-201ENST00000533906 236 ntBASIC2.49□□□□□ -2.01
HOXC4P09017 ELOCP31-201ENST00000540463 467 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms