Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.58□□□□□ -2
MBD3O95983 SNRPEP9-201ENST00000436794 238 ntBASIC2.58□□□□□ -2
MBD3O95983 LARP1BP3-201ENST00000437229 869 ntBASIC2.58□□□□□ -2
MBD3O95983 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MBD3O95983 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.58□□□□□ -2
MBD3O95983 Z73417.1-201ENST00000447373 778 ntBASIC2.58□□□□□ -2
MBD3O95983 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.58□□□□□ -2
MBD3O95983 AC011825.1-201ENST00000484967 388 ntBASIC2.58□□□□□ -2
MBD3O95983 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.58□□□□□ -2
MBD3O95983 AC080014.1-201ENST00000496877 1201 ntBASIC2.58□□□□□ -2
MBD3O95983 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.58□□□□□ -2
MBD3O95983 SUMO2P6-201ENST00000505273 288 ntBASIC2.58□□□□□ -2
MBD3O95983 AC021269.2-201ENST00000532318 330 ntBASIC2.58□□□□□ -2
MBD3O95983 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.58□□□□□ -2
MBD3O95983 MRPS36P5-201ENST00000551909 298 ntBASIC2.58□□□□□ -2
MBD3O95983 NACAP3-201ENST00000552100 481 ntBASIC2.58□□□□□ -2
MBD3O95983 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
MBD3O95983 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.58□□□□□ -2
MBD3O95983 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
MBD3O95983 HMGN2P15-201ENST00000585707 270 ntBASIC2.58□□□□□ -2
MBD3O95983 AC092106.3-201ENST00000611308 722 ntBASIC2.58□□□□□ -2
MBD3O95983 AC096577.2-201ENST00000611455 153 ntBASIC2.58□□□□□ -2
MBD3O95983 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.58□□□□□ -2
MBD3O95983 U2.21-201ENST00000637295 81 ntBASIC2.58□□□□□ -2
MBD3O95983 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
MBD3O95983 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
MBD3O95983 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
MBD3O95983 AC092125.1-201ENST00000562568 1995 ntBASIC2.58□□□□□ -2
MBD3O95983 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.57□□□□□ -2
MBD3O95983 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
MBD3O95983 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MBD3O95983 RNU6-884P-201ENST00000363889 107 ntBASIC2.57□□□□□ -2
MBD3O95983 Y_RNA.245-201ENST00000364493 95 ntBASIC2.57□□□□□ -2
MBD3O95983 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.57□□□□□ -2
MBD3O95983 AC096649.2-201ENST00000416186 393 ntBASIC2.57□□□□□ -2
MBD3O95983 RPL23AP83-201ENST00000434984 473 ntBASIC2.57□□□□□ -2
MBD3O95983 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
MBD3O95983 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.57□□□□□ -2
MBD3O95983 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.57□□□□□ -2
MBD3O95983 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.57□□□□□ -2
MBD3O95983 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.57□□□□□ -2
MBD3O95983 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.57□□□□□ -2
MBD3O95983 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.57□□□□□ -2
MBD3O95983 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.57□□□□□ -2
MBD3O95983 RNU6-717P-201ENST00000459076 104 ntBASIC2.57□□□□□ -2
MBD3O95983 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.57□□□□□ -2
MBD3O95983 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.57□□□□□ -2
MBD3O95983 SNORA31.3-201ENST00000516029 96 ntBASIC2.57□□□□□ -2
MBD3O95983 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
MBD3O95983 RNA5SP290-201ENST00000517133 127 ntBASIC2.57□□□□□ -2
MBD3O95983 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
MBD3O95983 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
MBD3O95983 MIR4999-201ENST00000585029 91 ntBASIC2.57□□□□□ -2
MBD3O95983 AC011471.1-201ENST00000585766 187 ntBASIC2.57□□□□□ -2
MBD3O95983 BNIP3P40-201ENST00000596017 556 ntBASIC2.57□□□□□ -2
MBD3O95983 AL355877.2-201ENST00000603670 358 ntBASIC2.57□□□□□ -2
MBD3O95983 AC006023.1-201ENST00000603944 259 ntBASIC2.57□□□□□ -2
MBD3O95983 AC009159.1-201ENST00000618386 642 ntBASIC2.57□□□□□ -2
MBD3O95983 AC112204.3-201ENST00000623822 332 ntBASIC2.57□□□□□ -2
MBD3O95983 AC103706.2-201ENST00000638080 240 ntBASIC2.57□□□□□ -2
MBD3O95983 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
MBD3O95983 MTND4P1-201ENST00000457501 1466 ntBASIC2.57□□□□□ -2
MBD3O95983 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
MBD3O95983 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
MBD3O95983 AL137003.2-201ENST00000606924 2538 ntBASIC2.57□□□□□ -2
MBD3O95983 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
MBD3O95983 AL391994.1-201ENST00000254724 282 ntBASIC2.56□□□□□ -2
MBD3O95983 RNU6-461P-201ENST00000364195 107 ntBASIC2.56□□□□□ -2
MBD3O95983 RNU6-278P-201ENST00000390945 109 ntBASIC2.56□□□□□ -2
MBD3O95983 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 RPL22P18-201ENST00000417197 377 ntBASIC2.56□□□□□ -2
MBD3O95983 BPY2DP-201ENST00000422208 265 ntBASIC2.56□□□□□ -2
MBD3O95983 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.56□□□□□ -2
MBD3O95983 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 MTND1P28-201ENST00000435623 950 ntBASIC2.56□□□□□ -2
MBD3O95983 AC098831.1-201ENST00000440661 216 ntBASIC2.56□□□□□ -2
MBD3O95983 RPS3AP12-201ENST00000443616 753 ntBASIC2.56□□□□□ -2
MBD3O95983 RPL7P36-201ENST00000444633 681 ntBASIC2.56□□□□□ -2
MBD3O95983 RPL12P25-201ENST00000455592 494 ntBASIC2.56□□□□□ -2
MBD3O95983 AC108059.3-201ENST00000456388 214 ntBASIC2.56□□□□□ -2
MBD3O95983 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 RPL26P9-201ENST00000457466 433 ntBASIC2.56□□□□□ -2
MBD3O95983 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
MBD3O95983 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 AC091951.3-201ENST00000504093 246 ntBASIC2.56□□□□□ -2
MBD3O95983 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 RNU6-390P-201ENST00000516259 103 ntBASIC2.56□□□□□ -2
MBD3O95983 SCARNA11.3-201ENST00000517276 130 ntBASIC2.56□□□□□ -2
MBD3O95983 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
MBD3O95983 AC090888.2-201ENST00000559765 1144 ntBASIC2.56□□□□□ -2
MBD3O95983 MIR4293-201ENST00000584305 78 ntBASIC2.56□□□□□ -2
MBD3O95983 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.56□□□□□ -2
MBD3O95983 AC007621.1-201ENST00000604544 437 ntBASIC2.56□□□□□ -2
MBD3O95983 AP000240.1-201ENST00000609910 452 ntBASIC2.56□□□□□ -2
MBD3O95983 AC025594.3-201ENST00000613068 790 ntBASIC2.56□□□□□ -2
MBD3O95983 AL139418.1-201ENST00000613613 177 ntBASIC2.56□□□□□ -2
MBD3O95983 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.56□□□□□ -2
MBD3O95983 AC009831.4-201ENST00000620744 325 ntBASIC2.56□□□□□ -2
MBD3O95983 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms