Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 SNORA51.4-201ENST00000364993 124 ntBASIC3.4□□□□□ -1.87
RTN3O95197 SAR1AP2-201ENST00000392696 594 ntBASIC3.4□□□□□ -1.87
RTN3O95197 MIR887-201ENST00000401258 79 ntBASIC3.4□□□□□ -1.87
RTN3O95197 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.4□□□□□ -1.87
RTN3O95197 CST9LP2-201ENST00000437612 320 ntBASIC3.4□□□□□ -1.87
RTN3O95197 CYCSP32-201ENST00000440548 321 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.4□□□□□ -1.87
RTN3O95197 KATNBL1P3-201ENST00000443475 909 ntBASIC3.4□□□□□ -1.87
RTN3O95197 ELOCP23-201ENST00000452014 332 ntBASIC3.4□□□□□ -1.87
RTN3O95197 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN3O95197 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN3O95197 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN3O95197 RN7SL504P-201ENST00000494496 287 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN3O95197 RN7SKP282-201ENST00000516824 299 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.4□□□□□ -1.87
RTN3O95197 AC106782.4-201ENST00000568264 210 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.4□□□□□ -1.87
RTN3O95197 MIR3167-201ENST00000579623 85 ntBASIC3.4□□□□□ -1.87
RTN3O95197 RSL24D1P11-201ENST00000591045 491 ntBASIC3.4□□□□□ -1.87
RTN3O95197 NUTF2P8-201ENST00000604593 363 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AL136363.1-201ENST00000605349 337 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AC005000.2-201ENST00000605468 310 ntBASIC3.4□□□□□ -1.87
RTN3O95197 RN7SKP299-201ENST00000606679 301 ntBASIC3.4□□□□□ -1.87
RTN3O95197 AL365204.3-201ENST00000612448 685 ntBASIC3.4□□□□□ -1.87
RTN3O95197 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN3O95197 AL161629.2-201ENST00000615347 275 ntBASIC3.4□□□□□ -1.87
RTN3O95197 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.4□□□□□ -1.87
RTN3O95197 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RTN3O95197 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN3O95197 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTN3O95197 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTN3O95197 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTN3O95197 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTN3O95197 SNORA26.7-201ENST00000391288 122 ntBASIC3.39□□□□□ -1.87
RTN3O95197 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.39□□□□□ -1.87
RTN3O95197 RNA5SP229-201ENST00000410809 99 ntBASIC3.39□□□□□ -1.87
RTN3O95197 RNU6-195P-201ENST00000411352 109 ntBASIC3.39□□□□□ -1.87
RTN3O95197 C1DP2-201ENST00000418167 426 ntBASIC3.39□□□□□ -1.87
RTN3O95197 MTCO2P34-201ENST00000421994 607 ntBASIC3.39□□□□□ -1.87
RTN3O95197 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN3O95197 AC093106.2-201ENST00000428212 385 ntBASIC3.39□□□□□ -1.87
RTN3O95197 SNRPEP9-201ENST00000436794 238 ntBASIC3.39□□□□□ -1.87
RTN3O95197 MTCO1P19-201ENST00000443487 500 ntBASIC3.39□□□□□ -1.87
RTN3O95197 Z99127.3-201ENST00000448158 395 ntBASIC3.39□□□□□ -1.87
RTN3O95197 RN7SL863P-201ENST00000462370 296 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC007182.2-201ENST00000489251 402 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC105313.1-201ENST00000509121 353 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC117522.2-201ENST00000510049 657 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN3O95197 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN3O95197 MIR2276-201ENST00000516886 89 ntBASIC3.39□□□□□ -1.87
RTN3O95197 RNU6-677P-201ENST00000516914 101 ntBASIC3.39□□□□□ -1.87
RTN3O95197 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN3O95197 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
RTN3O95197 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN3O95197 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.39□□□□□ -1.87
RTN3O95197 AC015871.2-201ENST00000603605 948 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC245014.2-201ENST00000603689 287 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC246785.4-201ENST00000605374 287 ntBASIC3.39□□□□□ -1.87
RTN3O95197 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTN3O95197 AL161734.1-201ENST00000609720 557 ntBASIC3.39□□□□□ -1.87
RTN3O95197 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN3O95197 AC010678.1-201ENST00000614118 713 ntBASIC3.39□□□□□ -1.87
RTN3O95197 AC138932.5-201ENST00000617759 563 ntBASIC3.39□□□□□ -1.87
RTN3O95197 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.39□□□□□ -1.87
RTN3O95197 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.39□□□□□ -1.87
RTN3O95197 MTND5P42-201ENST00000637720 498 ntBASIC3.39□□□□□ -1.87
RTN3O95197 LRRC77P-213ENST00000637727 880 ntBASIC3.39□□□□□ -1.87
RTN3O95197 MTND5P19-201ENST00000424872 1794 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC091564.4-201ENST00000533934 2194 ntBASIC3.38□□□□□ -1.87
RTN3O95197 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTN3O95197 RNU6-188P-201ENST00000364207 107 ntBASIC3.38□□□□□ -1.87
RTN3O95197 U8.9-201ENST00000365667 134 ntBASIC3.38□□□□□ -1.87
RTN3O95197 RNU6-946P-201ENST00000383878 107 ntBASIC3.38□□□□□ -1.87
RTN3O95197 RNU6-39P-201ENST00000384344 107 ntBASIC3.38□□□□□ -1.87
RTN3O95197 MIR558-201ENST00000384920 94 ntBASIC3.38□□□□□ -1.87
RTN3O95197 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTN3O95197 MIR888-201ENST00000401186 77 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN3O95197 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN3O95197 ISCA1P1-201ENST00000426679 387 ntBASIC3.38□□□□□ -1.87
RTN3O95197 MED13P1-201ENST00000428342 171 ntBASIC3.38□□□□□ -1.87
RTN3O95197 GPM6BP2-201ENST00000432046 144 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.38□□□□□ -1.87
RTN3O95197 AL353706.1-201ENST00000436728 494 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AL714022.1-201ENST00000439897 151 ntBASIC3.38□□□□□ -1.87
RTN3O95197 RPL21P2-201ENST00000440049 481 ntBASIC3.38□□□□□ -1.87
RTN3O95197 MTND4P25-201ENST00000441039 533 ntBASIC3.38□□□□□ -1.87
RTN3O95197 GPM6BP1-201ENST00000446387 144 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN3O95197 AC093392.2-201ENST00000450682 337 ntBASIC3.38□□□□□ -1.87
RTN3O95197 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.38□□□□□ -1.87
RTN3O95197 FABP5P15-201ENST00000453566 214 ntBASIC3.38□□□□□ -1.87
RTN3O95197 RPL12P25-201ENST00000455592 494 ntBASIC3.38□□□□□ -1.87
RTN3O95197 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.38□□□□□ -1.87
RTN3O95197 RNU7-23P-201ENST00000459465 62 ntBASIC3.38□□□□□ -1.87
RTN3O95197 MTND4P2-201ENST00000507767 1203 ntBASIC3.38□□□□□ -1.87
RTN3O95197 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms