Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM3O75382 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM3O75382 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRIM3O75382 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.55□□□□□ -2
TRIM3O75382 Y_RNA.510-201ENST00000384511 114 ntBASIC2.55□□□□□ -2
TRIM3O75382 MIR181A2-201ENST00000384863 110 ntBASIC2.55□□□□□ -2
TRIM3O75382 RNU6-278P-201ENST00000390945 109 ntBASIC2.55□□□□□ -2
TRIM3O75382 AL512633.1-201ENST00000399931 655 ntBASIC2.55□□□□□ -2
TRIM3O75382 MTCYBP36-201ENST00000404146 440 ntBASIC2.55□□□□□ -2
TRIM3O75382 AL513475.1-201ENST00000406602 315 ntBASIC2.55□□□□□ -2
TRIM3O75382 RNU2-33P-201ENST00000410344 192 ntBASIC2.55□□□□□ -2
TRIM3O75382 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.55□□□□□ -2
TRIM3O75382 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.55□□□□□ -2
TRIM3O75382 AC005005.2-201ENST00000420779 380 ntBASIC2.55□□□□□ -2
TRIM3O75382 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.55□□□□□ -2
TRIM3O75382 RPS27AP14-201ENST00000422868 454 ntBASIC2.55□□□□□ -2
TRIM3O75382 AC092047.1-201ENST00000424997 240 ntBASIC2.55□□□□□ -2
TRIM3O75382 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
TRIM3O75382 USP12PX-201ENST00000432383 1057 ntBASIC2.55□□□□□ -2
TRIM3O75382 RPL37P21-201ENST00000435890 276 ntBASIC2.55□□□□□ -2
TRIM3O75382 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.55□□□□□ -2
TRIM3O75382 AC005094.1-201ENST00000440420 368 ntBASIC2.55□□□□□ -2
TRIM3O75382 AL049734.2-201ENST00000441066 616 ntBASIC2.55□□□□□ -2
TRIM3O75382 RNU7-125P-201ENST00000458760 62 ntBASIC2.55□□□□□ -2
TRIM3O75382 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 AC004924.1-201ENST00000480160 781 ntBASIC2.55□□□□□ -2
TRIM3O75382 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 AF131216.2-201ENST00000512316 564 ntBASIC2.55□□□□□ -2
TRIM3O75382 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
TRIM3O75382 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.55□□□□□ -2
TRIM3O75382 AC090136.1-201ENST00000520009 240 ntBASIC2.55□□□□□ -2
TRIM3O75382 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.55□□□□□ -2
TRIM3O75382 ATP5F1P5-201ENST00000526403 760 ntBASIC2.55□□□□□ -2
TRIM3O75382 MTND4LP18-201ENST00000526864 291 ntBASIC2.55□□□□□ -2
TRIM3O75382 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 AC123904.2-201ENST00000548059 300 ntBASIC2.55□□□□□ -2
TRIM3O75382 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.55□□□□□ -2
TRIM3O75382 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.55□□□□□ -2
TRIM3O75382 AC002400.1-201ENST00000569310 726 ntBASIC2.55□□□□□ -2
TRIM3O75382 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 AP000403.1-201ENST00000603349 851 ntBASIC2.55□□□□□ -2
TRIM3O75382 MTCYBP22-201ENST00000603788 447 ntBASIC2.55□□□□□ -2
TRIM3O75382 ATP1B3P1-201ENST00000605365 821 ntBASIC2.55□□□□□ -2
TRIM3O75382 AC063944.3-201ENST00000609969 533 ntBASIC2.55□□□□□ -2
TRIM3O75382 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.55□□□□□ -2
TRIM3O75382 SCARNA15.3-201ENST00000626315 122 ntBASIC2.55□□□□□ -2
TRIM3O75382 SCARNA4.1-201ENST00000628597 123 ntBASIC2.55□□□□□ -2
TRIM3O75382 AP003399.1-201ENST00000637534 361 ntBASIC2.55□□□□□ -2
TRIM3O75382 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
TRIM3O75382 AC092593.1-201ENST00000515413 1815 ntBASIC2.54□□□□□ -2
TRIM3O75382 AL445523.1-201ENST00000451184 1362 ntBASIC2.54□□□□□ -2
TRIM3O75382 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM3O75382 SNORA5B-201ENST00000363786 132 ntBASIC2.54□□□□□ -2
TRIM3O75382 RNU5A-8P-201ENST00000364102 114 ntBASIC2.54□□□□□ -2
TRIM3O75382 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
TRIM3O75382 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
TRIM3O75382 TAS2R15P-201ENST00000390674 928 ntBASIC2.54□□□□□ -2
TRIM3O75382 RPS20P2-201ENST00000402520 389 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC010153.1-201ENST00000432862 727 ntBASIC2.54□□□□□ -2
TRIM3O75382 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.54□□□□□ -2
TRIM3O75382 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
TRIM3O75382 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
TRIM3O75382 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.54□□□□□ -2
TRIM3O75382 RPS20P22-201ENST00000473700 357 ntBASIC2.54□□□□□ -2
TRIM3O75382 RPL37P25-201ENST00000507308 276 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC113155.1-201ENST00000511141 769 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC119751.5-201ENST00000514077 770 ntBASIC2.54□□□□□ -2
TRIM3O75382 Y_RNA.717-201ENST00000517106 92 ntBASIC2.54□□□□□ -2
TRIM3O75382 RNA5SP291-201ENST00000517222 105 ntBASIC2.54□□□□□ -2
TRIM3O75382 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM3O75382 OR4R1P-201ENST00000529879 463 ntBASIC2.54□□□□□ -2
TRIM3O75382 DEFB108A-201ENST00000530110 222 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.54□□□□□ -2
TRIM3O75382 AC093012.1-202ENST00000549403 582 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC007954.1-201ENST00000554198 494 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.54□□□□□ -2
TRIM3O75382 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.54□□□□□ -2
TRIM3O75382 AL356432.3-201ENST00000568952 465 ntBASIC2.54□□□□□ -2
TRIM3O75382 MIR4293-201ENST00000584305 78 ntBASIC2.54□□□□□ -2
TRIM3O75382 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
TRIM3O75382 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
TRIM3O75382 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.54□□□□□ -2
TRIM3O75382 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.54□□□□□ -2
TRIM3O75382 AC108747.1-201ENST00000609508 535 ntBASIC2.54□□□□□ -2
TRIM3O75382 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
TRIM3O75382 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
TRIM3O75382 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
TRIM3O75382 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
TRIM3O75382 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM3O75382 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TRIM3O75382 ZNF271P-202ENST00000465539 1970 ntBASIC2.53□□□□□ -2
TRIM3O75382 RNU6-500P-201ENST00000362349 107 ntBASIC2.53□□□□□ -2
TRIM3O75382 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
TRIM3O75382 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
TRIM3O75382 RNU6-217P-201ENST00000384164 104 ntBASIC2.53□□□□□ -2
TRIM3O75382 RNU6-140P-201ENST00000384566 108 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms