Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC067852.3-201ENST00000589177 561 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 AL160290.3-201ENST00000604869 165 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 AL670379.4-201ENST00000605279 254 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 AC019193.3-201ENST00000609144 554 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 FAM157A-202ENST00000615155 405 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 AC133104.2-201ENST00000615272 193 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 AL359547.2-201ENST00000615810 418 ntBASIC4.95□□□□□ -1.62
GRIN3BO60391 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
GRIN3BO60391 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
GRIN3BO60391 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.94□□□□□ -1.62
GRIN3BO60391 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 AL049555.1-201ENST00000562834 1933 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 RNA5SP432-201ENST00000362480 116 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 RNU6-434P-201ENST00000384376 107 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 RNU6-393P-201ENST00000384475 107 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 MIR153-1-201ENST00000384914 90 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 RPL23AP69-201ENST00000431134 458 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.94□□□□□ -1.62
GRIN3BO60391 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.94□□□□□ -1.62
GRIN3BO60391 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 AC106872.2-201ENST00000494303 480 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 SMURF2P1-201ENST00000514992 481 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 SNORA14.1-201ENST00000516113 141 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 RNU6-1069P-201ENST00000516612 133 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 AC008694.2-201ENST00000517591 306 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 COX6CP5-201ENST00000527162 228 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 AC104984.5-201ENST00000586878 94 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.94□□□□□ -1.62
GRIN3BO60391 XIAPP1-201ENST00000603162 600 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 DUSP12P1-201ENST00000612874 516 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 AL157817.1-201ENST00000614264 790 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 AC119674.1-207ENST00000641355 633 ntBASIC4.94□□□□□ -1.62
GRIN3BO60391 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
GRIN3BO60391 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
GRIN3BO60391 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.94□□□□□ -1.62
GRIN3BO60391 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GRIN3BO60391 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
GRIN3BO60391 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GRIN3BO60391 AC058791.1-201ENST00000608412 3198 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
GRIN3BO60391 Y_RNA.28-201ENST00000362554 111 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GRIN3BO60391 RNU6-128P-201ENST00000383976 107 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AL356057.3-201ENST00000402607 340 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.93□□□□□ -1.62
GRIN3BO60391 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.93□□□□□ -1.62
GRIN3BO60391 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.93□□□□□ -1.62
GRIN3BO60391 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 RPL21P23-201ENST00000446654 460 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 RPS11P1-201ENST00000451072 473 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 FABP5P13-201ENST00000452144 328 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 RPL21P103-201ENST00000479921 488 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AP001086.1-201ENST00000494882 321 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.93□□□□□ -1.62
GRIN3BO60391 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AF186190.1-201ENST00000517470 480 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.93□□□□□ -1.62
GRIN3BO60391 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.93□□□□□ -1.62
GRIN3BO60391 AC063950.1-201ENST00000552036 308 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.93□□□□□ -1.62
GRIN3BO60391 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.93□□□□□ -1.62
GRIN3BO60391 AC087190.4-201ENST00000574616 8334 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 7SK.7-201ENST00000603504 247 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AC104763.2-201ENST00000604179 382 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 IGHV3-29-201ENST00000604817 344 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 SNORD91B-202ENST00000608459 222 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.93□□□□□ -1.62
GRIN3BO60391 MIR8057-201ENST00000620957 69 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 BMS1P21-201ENST00000634565 365 ntBASIC4.93□□□□□ -1.62
GRIN3BO60391 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.93□□□□□ -1.62
GRIN3BO60391 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.93□□□□□ -1.62
GRIN3BO60391 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
GRIN3BO60391 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GRIN3BO60391 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GRIN3BO60391 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
GRIN3BO60391 RNA5SP50-201ENST00000363731 107 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 SNORA38.1-201ENST00000364172 131 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RNU6-356P-201ENST00000384140 107 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RNU6-196P-201ENST00000384315 107 ntBASIC4.92□□□□□ -1.62
GRIN3BO60391 RNU6-601P-201ENST00000384540 107 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms