Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.03□□□□□ -1.92
PRKNO60260 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.03□□□□□ -1.92
PRKNO60260 USP12PX-201ENST00000432383 1057 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AL353572.1-201ENST00000442490 417 ntBASIC3.03□□□□□ -1.92
PRKNO60260 snoU13.4-201ENST00000458916 104 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RNU7-63P-201ENST00000459054 62 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RPL31P58-201ENST00000469001 379 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
PRKNO60260 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PRKNO60260 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 AC108860.1-201ENST00000484521 383 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RPL36AP51-201ENST00000487216 318 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RN7SL504P-201ENST00000494496 287 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC069439.1-201ENST00000494739 167 ntBASIC3.03□□□□□ -1.92
PRKNO60260 RPL23AP55-201ENST00000498163 452 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC116562.3-201ENST00000506136 177 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC117522.1-201ENST00000509821 380 ntBASIC3.03□□□□□ -1.92
PRKNO60260 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.03□□□□□ -1.92
PRKNO60260 PHBP14-201ENST00000512887 367 ntBASIC3.03□□□□□ -1.92
PRKNO60260 GMPSP1-201ENST00000514075 579 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.03□□□□□ -1.92
PRKNO60260 AC068587.5-201ENST00000528506 175 ntBASIC3.03□□□□□ -1.92
PRKNO60260 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PRKNO60260 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.03□□□□□ -1.92
PRKNO60260 AC093012.1-202ENST00000549403 582 ntBASIC3.03□□□□□ -1.92
PRKNO60260 HIGD1AP1-201ENST00000550979 275 ntBASIC3.03□□□□□ -1.92
PRKNO60260 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.03□□□□□ -1.92
PRKNO60260 AC055876.1-202ENST00000567053 138 ntBASIC3.03□□□□□ -1.92
PRKNO60260 MTCO3P24-201ENST00000572729 782 ntBASIC3.03□□□□□ -1.92
PRKNO60260 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.03□□□□□ -1.92
PRKNO60260 AC005951.2-201ENST00000576282 495 ntBASIC3.03□□□□□ -1.92
PRKNO60260 MIR3200-201ENST00000580767 85 ntBASIC3.03□□□□□ -1.92
PRKNO60260 MIR5195-201ENST00000583555 115 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 AL162413.1-201ENST00000603198 110 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 YPEL5P2-201ENST00000605553 359 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 AC093648.1-201ENST00000623546 606 ntBASIC3.03□□□□□ -1.92
PRKNO60260 AC005609.4-201ENST00000625071 447 ntBASIC3.03□□□□□ -1.92
PRKNO60260 MIR4275-201ENST00000636486 87 ntBASIC3.03□□□□□ -1.92
PRKNO60260 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.03□□□□□ -1.92
PRKNO60260 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.03□□□□□ -1.93
PRKNO60260 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.93
PRKNO60260 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.03□□□□□ -1.93
PRKNO60260 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
PRKNO60260 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
PRKNO60260 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 RNU6-600P-201ENST00000362524 99 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RNU6-525P-201ENST00000363685 104 ntBASIC3.02□□□□□ -1.93
PRKNO60260 SNORA62.1-201ENST00000364287 154 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RNU6-534P-201ENST00000364877 106 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RNU6-877P-201ENST00000383868 107 ntBASIC3.02□□□□□ -1.93
PRKNO60260 MIR184-201ENST00000384962 84 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AP000567.1-201ENST00000406413 156 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RNA5SP229-201ENST00000410809 99 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 USP9YP6-201ENST00000413550 854 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC114491.1-201ENST00000416095 246 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RAC1P6-201ENST00000423911 575 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC008850.1-201ENST00000427546 362 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKNO60260 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKNO60260 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKNO60260 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 WASF1P1-201ENST00000447560 1131 ntBASIC3.02□□□□□ -1.93
PRKNO60260 HMGB3P8-201ENST00000449709 577 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC115115.1-201ENST00000449927 248 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RPL23AP31-201ENST00000456160 467 ntBASIC3.02□□□□□ -1.93
PRKNO60260 HMGN2P16-201ENST00000456802 261 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RPL21P104-201ENST00000464143 478 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC083798.1-201ENST00000472671 131 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC126389.1-201ENST00000477436 290 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC021205.2-201ENST00000480069 347 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC233702.1-201ENST00000482905 502 ntBASIC3.02□□□□□ -1.93
PRKNO60260 RN7SL432P-201ENST00000484057 298 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 SNORD27.1-201ENST00000516319 72 ntBASIC3.02□□□□□ -1.93
PRKNO60260 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.02□□□□□ -1.93
PRKNO60260 AC011602.1-201ENST00000546484 331 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.02□□□□□ -1.93
PRKNO60260 AC008752.3-201ENST00000588113 712 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKNO60260 SDR42E1P2-201ENST00000614861 481 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC010133.1-201ENST00000615809 842 ntBASIC3.02□□□□□ -1.93
PRKNO60260 AC002553.4-201ENST00000616896 331 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms