Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.52□□□□□ -2.01
RIPK2O43353 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
RIPK2O43353 AL021997.1-201ENST00000605757 193 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 TUSC7.1-201ENST00000610969 165 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AC010678.1-201ENST00000614118 713 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AC021755.4-201ENST00000616620 456 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 MIR8057-201ENST00000620957 69 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 AC079416.3-201ENST00000624479 549 ntBASIC2.52□□□□□ -2.01
RIPK2O43353 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RIPK2O43353 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RIPK2O43353 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RIPK2O43353 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RIPK2O43353 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RIPK2O43353 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.51□□□□□ -2.01
RIPK2O43353 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RIPK2O43353 RNU6-1214P-201ENST00000363650 109 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 MIR34B-201ENST00000385076 84 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.51□□□□□ -2.01
RIPK2O43353 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.51□□□□□ -2.01
RIPK2O43353 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.51□□□□□ -2.01
RIPK2O43353 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.51□□□□□ -2.01
RIPK2O43353 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.51□□□□□ -2.01
RIPK2O43353 AC236972.1-201ENST00000433225 199 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.51□□□□□ -2.01
RIPK2O43353 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.51□□□□□ -2.01
RIPK2O43353 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.51□□□□□ -2.01
RIPK2O43353 RSL24D1P3-201ENST00000449255 495 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.51□□□□□ -2.01
RIPK2O43353 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
RIPK2O43353 RNA5SP216-201ENST00000516111 123 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 SNORA31.6-201ENST00000516241 130 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC105185.1-201ENST00000518705 535 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC087241.2-201ENST00000535801 324 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC022080.3-201ENST00000544433 482 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AL354943.1-201ENST00000572103 781 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 MIR4444-1-201ENST00000581696 74 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 MIR4444-2-201ENST00000584390 74 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.51□□□□□ -2.01
RIPK2O43353 AL592221.1-201ENST00000605266 382 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC112220.3-201ENST00000605502 502 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AC006270.3-201ENST00000605967 1036 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AP000676.3-201ENST00000623299 569 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 AP000770.2-201ENST00000623694 100 ntBASIC2.51□□□□□ -2.01
RIPK2O43353 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RIPK2O43353 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RIPK2O43353 AC004944.1-201ENST00000517807 3059 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RNU6-1167P-201ENST00000363227 94 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 SNORD46.1-201ENST00000364139 104 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RNU1-51P-201ENST00000365345 176 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 SNORA41-201ENST00000384675 132 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RNU4-72P-201ENST00000410754 173 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RNU2-68P-201ENST00000410878 191 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 USP9YP33-201ENST00000412220 421 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AF274854.1-201ENST00000413236 615 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 BTF3L4P3-201ENST00000418879 476 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.5□□□□□ -2.01
RIPK2O43353 AC244035.1-201ENST00000430042 390 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 USP9YP35-201ENST00000435696 412 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RPS24P13-201ENST00000442520 397 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 IFNA11P-201ENST00000446352 526 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 MTATP6P7-201ENST00000453315 681 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.5□□□□□ -2.01
RIPK2O43353 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.5□□□□□ -2.01
RIPK2O43353 AL139824.2-201ENST00000458731 1095 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RPL37P6-201ENST00000460682 294 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AL121769.1-201ENST00000469473 401 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RIPK2O43353 MTND2P14-201ENST00000482139 351 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 GZMAP1-201ENST00000503054 631 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 HSPE1P23-201ENST00000509838 286 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 RNU1-103P-201ENST00000516502 125 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AC078814.3-201ENST00000553036 491 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.5□□□□□ -2.01
RIPK2O43353 AC060771.1-201ENST00000582031 164 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 VN1R82P-201ENST00000601481 356 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AC008121.1-201ENST00000603244 268 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 Z99289.3-201ENST00000605586 594 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.5□□□□□ -2.01
RIPK2O43353 AC069294.1-201ENST00000608397 350 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 AC004908.2-201ENST00000609090 574 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 DUSP12P1-201ENST00000612874 516 ntBASIC2.5□□□□□ -2.01
RIPK2O43353 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RIPK2O43353 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
RIPK2O43353 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RIPK2O43353 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RIPK2O43353 AL139276.1-201ENST00000311910 1001 ntBASIC2.49□□□□□ -2.01
RIPK2O43353 RNU6-853P-201ENST00000364306 107 ntBASIC2.49□□□□□ -2.01
RIPK2O43353 SNORA44-201ENST00000384584 132 ntBASIC2.49□□□□□ -2.01
RIPK2O43353 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms