Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC010631.1-201ENST00000474150 156 ntBASIC2.25□□□□□ -2.05
LSM1O15116 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM1O15116 AC026801.1-201ENST00000497178 464 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.25□□□□□ -2.05
LSM1O15116 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM1O15116 AC023141.11-201ENST00000508864 202 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AC109445.1-201ENST00000512356 383 ntBASIC2.25□□□□□ -2.05
LSM1O15116 SNORD19.2-201ENST00000516978 73 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.25□□□□□ -2.05
LSM1O15116 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.25□□□□□ -2.05
LSM1O15116 AC010186.2-204ENST00000537668 439 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
LSM1O15116 MIR5571-201ENST00000577998 113 ntBASIC2.25□□□□□ -2.05
LSM1O15116 RPP40P2-201ENST00000603596 712 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AC007621.1-201ENST00000604544 437 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AL160281.1-201ENST00000605307 311 ntBASIC2.25□□□□□ -2.05
LSM1O15116 MIR6817-201ENST00000615588 66 ntBASIC2.25□□□□□ -2.05
LSM1O15116 AC079416.3-201ENST00000624479 549 ntBASIC2.25□□□□□ -2.05
LSM1O15116 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LSM1O15116 CENPCP1-201ENST00000533085 2578 ntBASIC2.24□□□□□ -2.05
LSM1O15116 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.24□□□□□ -2.05
LSM1O15116 Y_RNA.192-201ENST00000363977 102 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM1O15116 ISCA1P1-201ENST00000426679 387 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM1O15116 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 RPL21P134-201ENST00000453468 483 ntBASIC2.24□□□□□ -2.05
LSM1O15116 FABP5P15-201ENST00000453566 214 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.24□□□□□ -2.05
LSM1O15116 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 AC096576.1-201ENST00000489014 359 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LSM1O15116 RNA5SP148-201ENST00000516527 94 ntBASIC2.24□□□□□ -2.05
LSM1O15116 RNU6-703P-201ENST00000516946 107 ntBASIC2.24□□□□□ -2.05
LSM1O15116 RN7SKP258-201ENST00000517151 304 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 NACAP3-201ENST00000552100 481 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 AC007151.1-201ENST00000572774 483 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AC060771.1-201ENST00000582031 164 ntBASIC2.24□□□□□ -2.05
LSM1O15116 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.24□□□□□ -2.05
LSM1O15116 AL161798.1-201ENST00000604630 131 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AL449363.1-201ENST00000617815 186 ntBASIC2.24□□□□□ -2.05
LSM1O15116 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM1O15116 AP000676.3-201ENST00000623299 569 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AC116618.1-201ENST00000634617 774 ntBASIC2.24□□□□□ -2.05
LSM1O15116 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM1O15116 MIR7157-201ENST00000635801 60 ntBASIC2.24□□□□□ -2.05
LSM1O15116 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.24□□□□□ -2.05
LSM1O15116 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LSM1O15116 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LSM1O15116 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LSM1O15116 RNU6-1167P-201ENST00000363227 94 ntBASIC2.23□□□□□ -2.05
LSM1O15116 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LSM1O15116 AL136310.1-201ENST00000404926 654 ntBASIC2.23□□□□□ -2.05
LSM1O15116 MTATP6P20-201ENST00000414147 562 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.23□□□□□ -2.05
LSM1O15116 NPM1P11-201ENST00000417106 855 ntBASIC2.23□□□□□ -2.05
LSM1O15116 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 MTCO1P53-201ENST00000441633 699 ntBASIC2.23□□□□□ -2.05
LSM1O15116 GPM6BP3-201ENST00000442797 145 ntBASIC2.23□□□□□ -2.05
LSM1O15116 HMGN2P10-201ENST00000448085 265 ntBASIC2.23□□□□□ -2.05
LSM1O15116 MTATP6P7-201ENST00000453315 681 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 AC080013.2-201ENST00000460866 323 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AC128713.1-201ENST00000471495 306 ntBASIC2.23□□□□□ -2.05
LSM1O15116 RN7SL432P-201ENST00000484057 298 ntBASIC2.23□□□□□ -2.05
LSM1O15116 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.23□□□□□ -2.05
LSM1O15116 SNORA31.3-201ENST00000516029 96 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.23□□□□□ -2.05
LSM1O15116 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.23□□□□□ -2.05
LSM1O15116 AC105137.2-201ENST00000569073 466 ntBASIC2.23□□□□□ -2.05
LSM1O15116 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 AC025588.2-201ENST00000604851 466 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AC092574.1-201ENST00000609771 420 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AL133445.2-201ENST00000611191 527 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
LSM1O15116 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AL160394.1-201ENST00000624765 724 ntBASIC2.23□□□□□ -2.05
LSM1O15116 PCMTD1P7-201ENST00000634506 357 ntBASIC2.23□□□□□ -2.05
LSM1O15116 AC097655.1-201ENST00000635075 318 ntBASIC2.23□□□□□ -2.05
LSM1O15116 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LSM1O15116 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LSM1O15116 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
LSM1O15116 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.22□□□□□ -2.05
LSM1O15116 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LSM1O15116 OR56A5-201ENST00000340110 738 ntBASIC2.22□□□□□ -2.05
LSM1O15116 SNORD116.1-201ENST00000365628 92 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms