Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 RNU6-559P-201ENST00000516151 98 ntBASIC4.18□□□□□ -1.74
CBX4O00257 RNA5SP290-201ENST00000517133 127 ntBASIC4.18□□□□□ -1.74
CBX4O00257 RNA5SP454-201ENST00000517231 127 ntBASIC4.18□□□□□ -1.74
CBX4O00257 RNU6-323P-201ENST00000521915 107 ntBASIC4.18□□□□□ -1.74
CBX4O00257 OR5D17P-201ENST00000531492 978 ntBASIC4.18□□□□□ -1.74
CBX4O00257 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.18□□□□□ -1.74
CBX4O00257 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.18□□□□□ -1.74
CBX4O00257 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.18□□□□□ -1.74
CBX4O00257 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CBX4O00257 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.18□□□□□ -1.74
CBX4O00257 CYP4A43P-201ENST00000568156 121 ntBASIC4.18□□□□□ -1.74
CBX4O00257 AC007151.1-201ENST00000572774 483 ntBASIC4.18□□□□□ -1.74
CBX4O00257 AC053481.4-201ENST00000583164 216 ntBASIC4.18□□□□□ -1.74
CBX4O00257 MIR5684-201ENST00000585074 65 ntBASIC4.18□□□□□ -1.74
CBX4O00257 MIR5692C1-201ENST00000585309 91 ntBASIC4.18□□□□□ -1.74
CBX4O00257 AC023043.2-201ENST00000589678 1026 ntBASIC4.18□□□□□ -1.74
CBX4O00257 AC024220.1-201ENST00000603675 484 ntBASIC4.18□□□□□ -1.74
CBX4O00257 MIR432-201ENST00000606207 94 ntBASIC4.18□□□□□ -1.74
CBX4O00257 MIR7154-201ENST00000620673 73 ntBASIC4.18□□□□□ -1.74
CBX4O00257 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.18□□□□□ -1.74
CBX4O00257 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CBX4O00257 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CBX4O00257 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
CBX4O00257 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CBX4O00257 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.17□□□□□ -1.74
CBX4O00257 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
CBX4O00257 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CBX4O00257 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CBX4O00257 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CBX4O00257 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CBX4O00257 SNORA60-201ENST00000362396 134 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RNA5SP387-201ENST00000364226 106 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RNU6-395P-201ENST00000365662 106 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RNU6-128P-201ENST00000383976 107 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RNU6-1297P-201ENST00000384415 104 ntBASIC4.17□□□□□ -1.74
CBX4O00257 MIR548K-201ENST00000408406 116 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.17□□□□□ -1.74
CBX4O00257 RNA5SP129-201ENST00000410276 118 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RNU2-33P-201ENST00000410344 192 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RPL37P10-201ENST00000412884 288 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC018644.1-201ENST00000429934 551 ntBASIC4.17□□□□□ -1.74
CBX4O00257 GOT2P5-201ENST00000433995 546 ntBASIC4.17□□□□□ -1.74
CBX4O00257 HLA-N-201ENST00000437516 135 ntBASIC4.17□□□□□ -1.74
CBX4O00257 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CBX4O00257 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 RPL7P5-201ENST00000471472 736 ntBASIC4.17□□□□□ -1.74
CBX4O00257 SUMO2P6-201ENST00000505273 288 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.17□□□□□ -1.74
CBX4O00257 RNU2-58P-201ENST00000516403 183 ntBASIC4.17□□□□□ -1.74
CBX4O00257 RNA5SP468-201ENST00000516782 93 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC069113.1-201ENST00000517763 267 ntBASIC4.17□□□□□ -1.74
CBX4O00257 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.17□□□□□ -1.74
CBX4O00257 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.17□□□□□ -1.74
CBX4O00257 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 AL157871.3-201ENST00000557231 293 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.17□□□□□ -1.74
CBX4O00257 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 AC025627.2-201ENST00000576220 160 ntBASIC4.17□□□□□ -1.74
CBX4O00257 MIR1273C-201ENST00000578669 77 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC138761.3-201ENST00000579993 334 ntBASIC4.17□□□□□ -1.74
CBX4O00257 APOOP1-201ENST00000604695 592 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AC016727.1-205ENST00000605437 569 ntBASIC4.17□□□□□ -1.74
CBX4O00257 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.17□□□□□ -1.74
CBX4O00257 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.17□□□□□ -1.74
CBX4O00257 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.17□□□□□ -1.74
CBX4O00257 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.16□□□□□ -1.74
CBX4O00257 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CBX4O00257 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.16□□□□□ -1.74
CBX4O00257 SNORA71.3-201ENST00000362582 128 ntBASIC4.16□□□□□ -1.74
CBX4O00257 SNORD116-11-201ENST00000383882 92 ntBASIC4.16□□□□□ -1.74
CBX4O00257 MIR578-201ENST00000384828 96 ntBASIC4.16□□□□□ -1.74
CBX4O00257 RNU4-6P-201ENST00000410804 122 ntBASIC4.16□□□□□ -1.74
CBX4O00257 CRYBB2P1-203ENST00000415709 538 ntBASIC4.16□□□□□ -1.74
CBX4O00257 MTCO2P27-201ENST00000420740 428 ntBASIC4.16□□□□□ -1.74
CBX4O00257 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 AL358472.1-201ENST00000431295 329 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AL445584.1-201ENST00000431451 330 ntBASIC4.16□□□□□ -1.74
CBX4O00257 SNAP23P1-201ENST00000433229 246 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC073063.1-201ENST00000434352 607 ntBASIC4.16□□□□□ -1.74
CBX4O00257 PIGFP3-201ENST00000441918 722 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC009237.8-201ENST00000445492 379 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC007677.1-201ENST00000445757 515 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.16□□□□□ -1.74
CBX4O00257 VN1R17P-201ENST00000472048 1090 ntBASIC4.16□□□□□ -1.74
CBX4O00257 HMGB1P30-201ENST00000492455 606 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC009901.1-201ENST00000506703 541 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 RNU7-143P-201ENST00000516781 65 ntBASIC4.16□□□□□ -1.74
CBX4O00257 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 COPS8P3-201ENST00000526024 482 ntBASIC4.16□□□□□ -1.74
CBX4O00257 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.16□□□□□ -1.74
CBX4O00257 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
CBX4O00257 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.16□□□□□ -1.74
CBX4O00257 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.16□□□□□ -1.74
CBX4O00257 FRG2DP-202ENST00000566967 323 ntBASIC4.16□□□□□ -1.74
CBX4O00257 MTND6P33-201ENST00000571794 183 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms