Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNORD116-8-201ENST00000384365 95 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTND1P23-201ENST00000416931 372 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 BEND7P1-201ENST00000422058 457 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 GDI2P2-201ENST00000445131 608 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 EPS15P1-201ENST00000448836 336 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPL30P6-201ENST00000475925 342 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC104563.1-201ENST00000476147 376 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC022447.3-201ENST00000506865 495 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC022690.1-201ENST00000526681 550 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP004247.1-201ENST00000531556 1289 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR4307-201ENST00000582802 84 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 CLIC4P2-201ENST00000601934 717 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL357094.1-201ENST00000603845 844 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC104763.2-201ENST00000604179 382 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR1291-201ENST00000627649 87 ntBASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TMX2-CTNND1H3BSU7 CCT4P2-201ENST00000233836 1548 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 OR56A5-201ENST00000340110 738 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL162578.1-201ENST00000406202 378 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR320C1-201ENST00000408566 88 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTCO1P17-201ENST00000411522 491 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AF274854.1-201ENST00000413236 615 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTND4P20-201ENST00000424125 869 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 UBE2D3P2-201ENST00000424409 445 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC090774.1-201ENST00000435925 246 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 RABEPKP1-201ENST00000440529 1026 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 BZW1P2-201ENST00000473537 826 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC021382.1-201ENST00000483523 359 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC092436.1-201ENST00000506450 503 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPL37P25-201ENST00000507308 276 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNORA31.8-201ENST00000516327 108 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-678P-201ENST00000516832 109 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC007834.2-201ENST00000536310 343 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 OSBPL9P5-201ENST00000542581 171 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC109446.2-201ENST00000567872 497 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR3915-201ENST00000578518 97 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR4524B-201ENST00000581569 115 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP001004.1-201ENST00000582468 324 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP001429.1-201ENST00000602568 530 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL022099.1-201ENST00000604551 712 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC103710.4-201ENST00000609301 899 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC104010.1-201ENST00000616889 150 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL603755.1-201ENST00000619504 163 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TMX2-CTNND1H3BSU7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 Y_RNA.18-201ENST00000362461 102 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 SNORA41-201ENST00000384675 132 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL356421.1-201ENST00000403255 413 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL031577.2-201ENST00000404133 280 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPS15AP38-201ENST00000413110 372 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTCO3P12-201ENST00000416718 547 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 THAP5P1-201ENST00000439089 262 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL512286.1-201ENST00000439244 400 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 RPL26P6-201ENST00000440913 438 ntBASIC2.31□□□□□ -2.04
TMX2-CTNND1H3BSU7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms