Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC079781.2-201ENST00000446424 169 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC087588.1-201ENST00000462203 316 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 FAM133DP-201ENST00000464802 691 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC023194.1-201ENST00000493084 308 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC107401.1-201ENST00000503426 685 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 AL365204.3-201ENST00000612448 685 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 MIR6076-201ENST00000617521 113 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC53A6NM62 AL049641.1-201ENST00000441055 1948 ntBASIC3.31□□□□□ -1.88
LRRC53A6NM62 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC53A6NM62 UBE2L2-201ENST00000254302 429 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 RNU6-1167P-201ENST00000363227 94 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 Y_RNA.159-201ENST00000363674 87 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 SNORA62.3-201ENST00000365110 153 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 Y_RNA.367-201ENST00000365544 101 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 RNU6-1103P-201ENST00000384150 107 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 SNORA1.3-201ENST00000384676 136 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 MIR200C-201ENST00000384980 68 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC005300.1-201ENST00000428401 373 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC073464.1-201ENST00000429823 534 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 HMGB1P27-201ENST00000431429 603 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 Z82210.1-201ENST00000440037 231 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 RN7SL283P-201ENST00000489055 303 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 RPL9P6-201ENST00000492764 598 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 HSPD1P15-201ENST00000505573 1122 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC117522.1-201ENST00000509821 380 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC006445.2-201ENST00000510061 472 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC010493.1-201ENST00000513479 292 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC024619.4-201ENST00000580924 316 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 UBL5P2-201ENST00000583788 219 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC146944.4-201ENST00000602697 718 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC098826.3-201ENST00000603823 466 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AL391646.1-201ENST00000603860 190 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC104763.2-201ENST00000604179 382 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC007684.1-201ENST00000609671 477 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC53A6NM62 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC093648.1-201ENST00000623546 606 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AC009161.2-201ENST00000624626 138 ntBASIC3.3□□□□□ -1.88
LRRC53A6NM62 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC53A6NM62 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 MTCO1P12-201ENST00000414273 1543 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AL137003.2-201ENST00000606924 2538 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 SNORA24.1-201ENST00000384401 135 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 MIR183-201ENST00000384958 110 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC092809.3-201ENST00000415453 231 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 MTCO1P21-201ENST00000416634 589 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC012498.1-201ENST00000424037 437 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC092047.1-201ENST00000424997 240 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 MTND4P25-201ENST00000441039 533 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 PRDX3P3-201ENST00000447765 522 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 RPL21P41-201ENST00000459863 264 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC091153.1-201ENST00000466297 402 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC126389.1-201ENST00000477436 290 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 RPL30P14-201ENST00000482744 348 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 RPS3AP14-201ENST00000483907 780 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 RN7SL633P-201ENST00000488974 297 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AL160314.1-201ENST00000490836 438 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 HMGB1P29-201ENST00000505659 499 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 RNU6-1282P-201ENST00000516735 96 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 AP001646.1-201ENST00000527936 915 ntBASIC3.29□□□□□ -1.88
LRRC53A6NM62 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRC53A6NM62 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms