Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.94□□□□□ -2.26
CNOT1A5YKK6 PCNAP1-202ENST00000595299 752 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC010889.1-201ENST00000566193 2666 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.94□□□□□ -2.26
CNOT1A5YKK6 RPL7P27-201ENST00000403775 720 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC004022.2-201ENST00000413824 193 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AL356379.1-201ENST00000414105 126 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 PGBD4P6-201ENST00000421501 610 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 TMEM167AP1-201ENST00000423409 219 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC093155.1-201ENST00000440164 826 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 GDI2P2-201ENST00000445131 608 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.94□□□□□ -2.26
CNOT1A5YKK6 MTCYBP35-201ENST00000503630 1137 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 LINC00933-203ENST00000559812 219 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.94□□□□□ -2.26
CNOT1A5YKK6 BNIP3P26-201ENST00000600827 554 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 DPRXP5-201ENST00000604662 539 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC018755.4-201ENST00000619715 454 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 AC068880.5-201ENST00000624331 290 ntBASIC0.94□□□□□ -2.26
CNOT1A5YKK6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 RNU6-222P-201ENST00000362438 107 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 SNORA38-201ENST00000363946 132 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC004854.1-201ENST00000440356 349 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 SYPL1P1-201ENST00000473622 768 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 EIF4EP3-201ENST00000498782 656 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AP005902.1-201ENST00000521358 186 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC025918.2-201ENST00000558683 763 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC106052.1-201ENST00000608029 497 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC139769.3-201ENST00000618383 175 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AL161651.1-201ENST00000440882 223 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC108157.1-201ENST00000510511 539 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 SNRPGP16-201ENST00000533275 226 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 AP006248.3-201ENST00000623580 594 ntBASIC0.93□□□□□ -2.26
CNOT1A5YKK6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
CNOT1A5YKK6 RNU6-1331P-201ENST00000363658 106 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 Z86062.1-201ENST00000406773 777 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 RPL7P34-201ENST00000433316 712 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 RPS24P6-201ENST00000452670 400 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 SNORA31.23-201ENST00000517219 133 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 MIR4287-201ENST00000579398 78 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC015726.3-201ENST00000624501 418 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 RNU1-105P-201ENST00000363470 161 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC023347.2-201ENST00000433994 462 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 HMGB1P22-201ENST00000505315 124 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AL109918.3-201ENST00000603072 338 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 HMGB1P24-202ENST00000615653 685 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC009090.3-201ENST00000616553 565 ntBASIC0.92□□□□□ -2.26
CNOT1A5YKK6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.92□□□□□ -2.26
CNOT1A5YKK6 MIR320B1-201ENST00000390209 79 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC093716.1-201ENST00000435923 377 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 RNU2-19P-201ENST00000517288 84 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 OR6C7P-201ENST00000547875 934 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC021755.4-201ENST00000616620 456 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC092140.2-201ENST00000618027 521 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 RNU6-955P-201ENST00000410497 104 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 RPL21P90-201ENST00000415692 466 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC244636.1-201ENST00000421152 228 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 ELOCP11-201ENST00000436690 332 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 ELOCP16-201ENST00000444494 332 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 OR6K5P-201ENST00000447050 945 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.91□□□□□ -2.26
CNOT1A5YKK6 COX6CP18-201ENST00000448769 222 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC067942.3-201ENST00000512025 362 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 EIF4EP5-201ENST00000528228 640 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.91□□□□□ -2.26
CNOT1A5YKK6 MIR3616-201ENST00000584070 92 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AL161629.2-201ENST00000615347 275 ntBASIC0.91□□□□□ -2.26
CNOT1A5YKK6 AC121333.1-201ENST00000567488 2709 ntBASIC0.9□□□□□ -2.26
CNOT1A5YKK6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.9□□□□□ -2.26
CNOT1A5YKK6 AL356320.2-201ENST00000417263 507 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC099548.1-201ENST00000421443 426 ntBASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.9□□□□□ -2.27
CNOT1A5YKK6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms