Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 RNU6-481P-201ENST00000384194 107 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 RNU2-49P-201ENST00000410666 184 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 RPL31P63-201ENST00000422565 375 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 ZYG11AP1-201ENST00000430329 837 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 HMGN2P3-201ENST00000433603 273 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 GTF2IP7-202ENST00000436677 309 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 HMGN2P5-201ENST00000436882 273 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 MTCYBP11-201ENST00000447254 1109 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 PMCHL2-203ENST00000457791 237 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 snoU13.23-201ENST00000458863 104 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC079203.1-201ENST00000487972 404 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC108210.2-201ENST00000503681 201 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC008526.1-201ENST00000509149 338 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 RNU6-548P-201ENST00000517083 115 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 NRON-201ENST00000517270 370 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC012435.1-202ENST00000568772 240 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC124283.4-201ENST00000581815 456 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 MIR3199-1-201ENST00000582434 88 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AP001269.3-201ENST00000588718 329 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AL627230.6-201ENST00000611129 280 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC253576.2-201ENST00000618815 580 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC002550.2-201ENST00000621246 394 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 AC025048.6-202ENST00000627667 438 ntBASIC1.35□□□□□ -2.19
TRAV3A0A0B4J244 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 RNU5E-8P-201ENST00000363502 116 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 RNU6-1066P-201ENST00000363573 105 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 RNU6-234P-201ENST00000365229 104 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AL357078.2-201ENST00000416486 427 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 EIF4EP4-201ENST00000424916 578 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 RPL26P9-201ENST00000457466 433 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 RPS20P20-201ENST00000460498 340 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 MTND4P2-201ENST00000507767 1203 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC010460.2-201ENST00000509054 677 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 MIR892C-201ENST00000516410 77 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AK6P1-201ENST00000540219 478 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 DUXAP1-201ENST00000556632 463 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 MTND4LP5-201ENST00000605152 292 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC068944.2-201ENST00000610373 403 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AL118556.2-201ENST00000614375 824 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC073592.7-201ENST00000623659 507 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 U2.21-201ENST00000637295 81 ntBASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
TRAV3A0A0B4J244 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.34□□□□□ -2.2
TRAV3A0A0B4J244 AC011477.1-204ENST00000623416 1325 ntBASIC1.34□□□□□ -2.2
TRAV3A0A0B4J244 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 CCNG1P1-201ENST00000406783 885 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 USP9YP19-201ENST00000412165 485 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 USP9YP13-201ENST00000417797 480 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 MED14P1-201ENST00000430517 648 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 COX6CP18-201ENST00000448769 222 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC005297.2-201ENST00000450430 606 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AL121769.1-201ENST00000469473 401 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 RPS15AP17-201ENST00000470598 390 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 TRBV1-201ENST00000476502 284 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC105252.1-201ENST00000503089 286 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC093281.2-201ENST00000510153 597 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 RNA5SP291-201ENST00000517222 105 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC118273.2-201ENST00000532092 465 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 ZNF971P-201ENST00000562068 1249 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC007151.1-201ENST00000572774 483 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 ZNF92P2-201ENST00000600543 1059 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC069294.1-201ENST00000608397 350 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC104763.3-201ENST00000613765 618 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AL603758.1-201ENST00000618654 241 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC109809.1-201ENST00000619665 545 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AL159972.1-201ENST00000625150 448 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 AC110491.1-201ENST00000562191 2010 ntBASIC1.33□□□□□ -2.2
TRAV3A0A0B4J244 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC005539.1-201ENST00000443768 1479 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms