Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC023632.4-201ENST00000517783 191 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC022690.1-201ENST00000526681 550 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC023050.3-201ENST00000541142 333 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC006064.5-201ENST00000541782 248 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR4444-1-201ENST00000581696 74 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR4444-2-201ENST00000584390 74 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC104260.1-201ENST00000616660 539 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 MAPK10-373ENST00000641983 6772 ntBASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHGA3Q9Y5H0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-845P-201ENST00000362578 103 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RNA5SP322-201ENST00000363617 119 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.166-201ENST00000363730 102 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 SNORA62.3-201ENST00000365110 153 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-395P-201ENST00000365662 106 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 SNORD70.1-201ENST00000391007 85 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SKP32-201ENST00000410167 303 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 CYCSP19-201ENST00000411715 316 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 NCOR1P3-201ENST00000420479 303 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 MTCO3P46-201ENST00000425787 232 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 AL592045.1-201ENST00000429867 352 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 USP9YP8-201ENST00000441913 500 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 PIGFP3-201ENST00000441918 722 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RPS15AP27-201ENST00000449183 343 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RPL21P41-201ENST00000459863 264 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 HMGN1P12-201ENST00000499125 195 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RNA5SP471-201ENST00000516971 106 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-1314P-201ENST00000517139 104 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SKP256-201ENST00000517201 314 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 OR11H5P-201ENST00000554039 926 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 MTCO3P23-201ENST00000561363 289 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SL703P-201ENST00000578485 302 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR548AC-201ENST00000585049 88 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 Z99571.1-201ENST00000636677 394 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 AC008013.2-202ENST00000637965 364 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 AL049641.1-201ENST00000441055 1948 ntBASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PCDHGA3Q9Y5H0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 U3.12-201ENST00000364498 214 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-715P-201ENST00000365204 103 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 Y_RNA.373-201ENST00000365600 103 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 POLHP1-201ENST00000411806 470 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC063979.1-201ENST00000415539 377 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC092047.1-201ENST00000424997 240 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AL356535.1-201ENST00000440335 398 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RPS24P13-201ENST00000442520 397 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 FABP5P15-201ENST00000453566 214 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 MTND1P11-201ENST00000456661 876 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU7-167P-201ENST00000459160 62 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 KC877373.1-201ENST00000479066 408 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 TRBVA-201ENST00000498804 316 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC017037.1-201ENST00000508460 471 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RN7SKP13-201ENST00000515933 244 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RNU6-189P-201ENST00000516120 101 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC087241.2-201ENST00000535801 324 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 LARP7P1-201ENST00000605576 316 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AL022345.1-201ENST00000607292 135 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 AC092807.2-201ENST00000609367 243 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 MIR7151-201ENST00000617477 60 ntBASIC3.98□□□□□ -1.77
PCDHGA3Q9Y5H0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms