Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 RN7SKP256-201ENST00000517201 314 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC090281.1-201ENST00000523019 276 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC087241.2-201ENST00000535801 324 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC093027.1-201ENST00000546698 429 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 SNORA51-201ENST00000606420 132 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC022893.3-201ENST00000607665 437 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AC009570.1-201ENST00000609599 745 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 MIR6868-201ENST00000611215 58 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 AL136221.1-201ENST00000621449 509 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 MTND4P35-201ENST00000604257 1375 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 IPO8P1-201ENST00000455509 3109 ntBASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB1Q9Y5F3 MAPK10-253ENST00000641010 4072 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-600P-201ENST00000362524 99 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-525P-201ENST00000363685 104 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 MIR7-3-201ENST00000384898 110 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AL365400.1-201ENST00000431854 640 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 TAAR7P-201ENST00000436141 242 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 IFNA20P-201ENST00000436840 528 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC007677.1-201ENST00000445757 515 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AL590639.1-201ENST00000456484 337 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 SCARNA18-201ENST00000459004 134 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 HMGN1P10-201ENST00000474557 553 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 NARSP2-201ENST00000518524 679 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 BTF3P12-201ENST00000519620 469 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AL592436.1-201ENST00000605135 558 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC012314.7-201ENST00000619693 93 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 AC121333.1-201ENST00000567488 2709 ntBASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB1Q9Y5F3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AP004289.2-201ENST00000444413 1457 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 CISD1P1-201ENST00000393907 327 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 NCOR1P3-201ENST00000420479 303 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 TBCAP1-201ENST00000436520 327 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC083863.1-201ENST00000438811 231 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 HMGB1P37-201ENST00000439613 609 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC004801.2-202ENST00000463559 283 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 RPS15AP34-201ENST00000487776 387 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC104136.1-201ENST00000512969 394 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 SCARNA15.1-201ENST00000516384 125 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 RNU6-143P-201ENST00000516942 93 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 IGKV2-23-201ENST00000518729 323 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 OR5D17P-201ENST00000531492 978 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC037471.2-201ENST00000564941 598 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC092807.2-201ENST00000609367 243 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC107294.1-201ENST00000609524 467 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AC009233.1-201ENST00000616477 371 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 AL713922.2-201ENST00000619384 716 ntBASIC3.94□□□□□ -1.78
PCDHB1Q9Y5F3 RMST_9.1-201ENST00000619945 193 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms