Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
USP18Q9UMW8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
USP18Q9UMW8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.19□□□□□ -1.74
USP18Q9UMW8 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 ZNF285B-201ENST00000561698 1767 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 POLHP1-201ENST00000411806 470 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 AL691449.1-201ENST00000426570 421 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC024082.2-201ENST00000434771 238 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 RPS15AP27-201ENST00000449183 343 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC004801.2-202ENST00000463559 283 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 RN7SKP60-201ENST00000516985 239 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC090281.1-201ENST00000523019 276 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 Z82243.1-201ENST00000609432 473 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 MIR6868-201ENST00000611215 58 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 AC068254.2-201ENST00000623938 3577 ntBASIC4.18□□□□□ -1.74
USP18Q9UMW8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
USP18Q9UMW8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
USP18Q9UMW8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
USP18Q9UMW8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP18Q9UMW8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP18Q9UMW8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP18Q9UMW8 MTND5P1-201ENST00000445440 1375 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP18Q9UMW8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 RN7SKP44-201ENST00000363602 316 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 MTCO1P29-201ENST00000496868 288 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 HMGB1P22-201ENST00000505315 124 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 Y_RNA.689-201ENST00000516589 107 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AC090136.1-201ENST00000520009 240 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 ERHP1-201ENST00000523006 310 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AP004371.1-201ENST00000525240 214 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AC005951.2-201ENST00000576282 495 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 MIR3124-201ENST00000582636 67 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 SNORD84-203ENST00000584275 78 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AL138889.2-201ENST00000603883 242 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AC064836.2-201ENST00000609491 462 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AC009570.1-201ENST00000609599 745 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AC103705.1-201ENST00000619013 241 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 MTND5P42-201ENST00000637720 498 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
USP18Q9UMW8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 PRO1804-201ENST00000623780 2050 ntBASIC4.17□□□□□ -1.74
USP18Q9UMW8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.17□□□□□ -1.74
USP18Q9UMW8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
USP18Q9UMW8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.16□□□□□ -1.74
USP18Q9UMW8 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 RNU6-335P-201ENST00000364563 113 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 RNA5SP235-201ENST00000365411 114 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 Y_RNA.399-201ENST00000383955 105 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 RNU6-1227P-201ENST00000383981 107 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 Y_RNA.431-201ENST00000384086 102 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 RNU6-817P-201ENST00000391083 104 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 PTMAP5-201ENST00000393073 333 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 RN7SKP156-201ENST00000410308 342 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 AL354751.2-201ENST00000415471 210 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 AC079780.1-201ENST00000428259 207 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.16□□□□□ -1.74
USP18Q9UMW8 HMGN2P31-201ENST00000432430 273 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 NDUFA5P4-201ENST00000436704 385 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 HMGB3P11-201ENST00000440127 604 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 FABP5P13-201ENST00000452144 328 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 RPS26P15-201ENST00000488067 348 ntBASIC4.16□□□□□ -1.74
USP18Q9UMW8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.16□□□□□ -1.74
USP18Q9UMW8 AC074250.1-201ENST00000511117 192 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms