Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 U3.11-201ENST00000364476 212 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RNU6-1283P-201ENST00000365314 105 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RNU6-39P-201ENST00000384344 107 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RNU6-278P-201ENST00000390945 109 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AL138885.1-201ENST00000405921 675 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RNA5SP107-201ENST00000411358 122 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AL353193.1-201ENST00000421444 268 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 MRPS10P2-201ENST00000431226 381 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RBMX2P4-201ENST00000441256 376 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AL162389.1-201ENST00000449233 177 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AL049830.2-201ENST00000480072 201 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 RPS15AP36-201ENST00000492022 382 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC114797.1-201ENST00000514003 728 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AP003034.1-201ENST00000534621 422 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 HMGB1P33-201ENST00000563485 527 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC105224.1-201ENST00000587055 421 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 GLUD1P4-201ENST00000590914 418 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC073657.2-201ENST00000605661 303 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 TUG1_2.1-201ENST00000614234 87 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AL603758.1-201ENST00000618654 241 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC009161.2-201ENST00000624626 138 ntBASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC9Q9UKV0 AC093010.3-201ENST00000570269 15214 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RNY1P12-201ENST00000364251 105 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RNU1-140P-201ENST00000365040 165 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RNU4-12P-201ENST00000365233 139 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RNU1-39P-201ENST00000383897 165 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RNU6-456P-201ENST00000384493 107 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 SNORD115-47-201ENST00000391226 86 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AL590002.1-201ENST00000406554 418 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 BTF3P7-201ENST00000407097 488 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 MTND1P23-201ENST00000416931 372 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 PPP1R11P2-201ENST00000423543 382 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 DPPA2P1-201ENST00000428060 556 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AL158071.1-201ENST00000430315 461 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RPL23AP30-201ENST00000432419 501 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 SNRPEP4-201ENST00000435815 279 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 RPS15AP9-201ENST00000439856 381 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 MTND2P24-201ENST00000453434 806 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AL049714.1-201ENST00000466686 347 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AC084357.1-201ENST00000473404 255 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AC092325.1-201ENST00000566449 554 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 AC005183.1-201ENST00000603687 1979 ntBASIC4.05□□□□□ -1.76
HDAC9Q9UKV0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.22-201ENST00000362492 102 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 RNU6-223P-201ENST00000362830 107 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 SNORD56.2-201ENST00000363242 71 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 Y_RNA.450-201ENST00000384198 113 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AL138878.1-201ENST00000405131 347 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 UBE2FP1-201ENST00000416536 447 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 MTATP6P18-201ENST00000417994 673 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 ARF4P2-201ENST00000430209 526 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 GPR143P-201ENST00000434155 205 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC140076.1-201ENST00000449897 361 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC109925.1-201ENST00000478069 331 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 HMGN1P28-201ENST00000521340 364 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC008489.1-201ENST00000524271 483 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 OR5AQ1P-201ENST00000527596 927 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 ARL2BPP2-201ENST00000550907 489 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AL163153.1-201ENST00000554223 283 ntBASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.04□□□□□ -1.76
HDAC9Q9UKV0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms