Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC005592.1-201ENST00000566527 1640 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC004925.1-201ENST00000624256 2706 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.2-201ENST00000362330 96 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 RNA5SP235-201ENST00000365411 114 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 SNORA70C-201ENST00000384538 135 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 MIR514A1-201ENST00000385133 98 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-907P-201ENST00000390924 102 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 U3.30-201ENST00000391308 210 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-174P-201ENST00000410406 106 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 TBCAP2-201ENST00000416175 326 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AL592045.1-201ENST00000429867 352 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC069285.2-201ENST00000440210 275 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC133473.1-201ENST00000455173 299 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC034236.1-201ENST00000469891 373 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC108860.1-201ENST00000484521 383 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC007016.1-201ENST00000512110 244 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 SNORA31.20-201ENST00000517111 133 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AP004371.1-201ENST00000525240 214 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC113195.1-201ENST00000579952 141 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 HMGB2P1-201ENST00000591146 634 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC098826.3-201ENST00000603823 466 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 NUTF2P8-201ENST00000604593 363 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AL161798.1-201ENST00000604630 131 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC091979.2-201ENST00000607514 214 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AL591516.1-201ENST00000611326 274 ntBASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CDC42EP3Q9UKI2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 MIR448-201ENST00000362131 111 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-1167P-201ENST00000363227 94 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.176-201ENST00000363815 109 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-173P-201ENST00000364215 104 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 RNU6-335P-201ENST00000364563 113 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.324-201ENST00000365165 102 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 SNORA37-201ENST00000384504 129 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 MIR134-201ENST00000385258 73 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 MIR301A-201ENST00000385261 86 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC096644.2-201ENST00000429278 159 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AL133396.1-201ENST00000432048 687 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 DHX9P1-201ENST00000436565 3076 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 RANP8-201ENST00000444720 713 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 RPL23AP24-201ENST00000458203 385 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC010469.1-201ENST00000463864 576 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC108751.2-201ENST00000469993 231 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC092451.1-201ENST00000480211 153 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC068781.1-201ENST00000488231 618 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 Y_RNA.719-201ENST00000517156 106 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC106785.1-201ENST00000565935 262 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC087190.4-201ENST00000574616 8334 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 OR1M4P-201ENST00000589199 287 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AC092447.9-201ENST00000603395 144 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AL160281.1-201ENST00000605307 311 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 AL121932.1-201ENST00000605542 214 ntBASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDC42EP3Q9UKI2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDC42EP3Q9UKI2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms